RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 USP41Q3LFD5 358 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 HSP90AA4PQ58FG1 418 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 RTP2Q5QGT7 225 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 EEF1DP3Q658K8 133 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 LILRA6Q6PI73 481 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 PRSS55Q6UWB4 352 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 CCDC186Q7Z3E2 898 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 ZBTB8OSQ8IWT0 167 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 HACE1Q8IYU2 909 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 ATOH1Q92858 354 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 PRIMPOLQ96LW4 560 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 ZNF830Q96NB3 372 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 MYADMQ96S97 322 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 TUBGCP2Q9BSJ2 902 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 KCNF1Q9H3M0 494 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 METTL14Q9HCE5 456 aaKnown RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 WDR6Q9NNW5 1121 aaKnown RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 SPTLC3Q9NUV7 552 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 DUSP12Q9UNI6 340 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 CLUHO75153 1309 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 PIEZO1Q92508 2521 aa11.84□□□□□ -0.51
HMGCL-204ENST00000436439 PDCD11Q14690 1871 aaKnown RBP11.84□□□□□ -0.51
HMGCL-204ENST00000436439 NOTCH4Q99466 2003 aa11.83□□□□□ -0.51
HMGCL-204ENST00000436439 CLIC2O15247 247 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 PI15O43692 258 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 TADA2AO75478 443 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 RECQL4O94761 1208 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 KIF4AO95239 1232 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 PAPLNO95428 1278 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 PRKCBP05771 671 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 TPM2P07951 284 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 IGFBP6P24592 240 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-204ENST00000436439 GBP2P32456 591 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-204ENST00000436439 PSMC2P35998 433 aaKnown RBP11.83□□□□□ -0.52
HMGCL-204ENST00000436439 TERF1P54274 439 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 TUSC3Q13454 348 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-204ENST00000436439 MAPK6Q16659 721 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 MAN2A1Q16706 1144 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 ASTLQ6HA08 431 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-204ENST00000436439 SLFN12LQ6IEE8 588 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 ZPBP2Q6X784 338 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 TRIM59Q8IWR1 403 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 FLCNQ8NFG4 579 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 KIAA1524Q8TCG1 905 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 SMG7Q92540 1137 aaKnown RBP11.83□□□□□ -0.52
HMGCL-204ENST00000436439 RHOBTB2Q9BYZ6 727 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 MFSD1Q9H3U5 465 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 INTS13Q9NVM9 706 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 FNIP2Q9P278 1114 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 ANK1P16157 1881 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 DMDP11532 3685 aa11.83□□□□□ -0.52
HMGCL-204ENST00000436439 LGALS16A8MUM7 142 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 ACKR2O00590 384 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 CITO14578 2027 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 HNRNPDLO14979 420 aaKnown RBP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 N4BP3O15049 544 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 AKAP3O75969 853 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 EPB41P11171 864 aaKnown RBP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 ADSSP30520 456 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 PBX1P40424 430 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 MTIF2P46199 727 aaKnown RBP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 COL4A3Q01955 1670 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 ENPEPQ07075 957 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 PRPF4BQ13523 1007 aaKnown RBP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 NOLC1Q14978 699 aaKnown RBP eCLIP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 CCDC40Q4G0X9 1142 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 MIIPQ5JXC2 388 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 ARMCX5Q6P1M9 558 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 SLC39A4Q6P5W5 647 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 XXYLT1Q8NBI6 393 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 ST13P5Q8NFI4 369 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 HDAC7Q8WUI4 952 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 EEF2KMTQ96G04 330 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 BORCS6Q96GS4 357 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 CLSTN3Q9BQT9 956 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 IKZF4Q9H2S9 585 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 PLEKHA4Q9H4M7 779 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 ARMCX3Q9UH62 379 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-204ENST00000436439 FRMD4BQ9Y2L6 1034 aa11.82□□□□□ -0.52
HMGCL-204ENST00000436439 SF3B1O75533 1304 aaKnown RBP eCLIP11.81□□□□□ -0.52
HMGCL-204ENST00000436439 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 ANKRD63C9JTQ0 380 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 ADAM12O43184 909 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 GFRA3O60609 400 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 TOM1L1O75674 476 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 THP07101 528 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 LIG4P49917 911 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 CLCN5P51795 746 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 NUBP1P53384 320 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 TMEM132AQ24JP5 1023 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 VWA3BQ502W6 1294 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 FAM171A1Q5VUB5 890 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 CYP26C1Q6V0L0 522 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 CEP57Q86XR8 500 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms