RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 TMEM120BA0PK00 339 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 TTLL13PA6NNM8 815 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 LIASO43766 372 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 MSCO60682 206 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 GJB6O95452 261 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 OAS1P00973 400 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 ABHD2P08910 425 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 SSTR3P32745 418 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CDH5P33151 784 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 EFNA5P52803 228 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 RPL7AP62424 266 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 LMNB2Q03252 620 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 MCL1Q07820 350 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 IZUMO3Q5VZ72 239 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CDCA2Q69YH5 1023 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 LBX2Q6XYB7 198 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 SEPT14Q6ZU15 432 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 ZCCHC9Q8N567 271 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 ANKS4BQ8N8V4 417 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 RBM41Q96IZ5 413 aaKnown RBP17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 SLITRK1Q96PX8 696 aa17.04■□□□□ 0.32
HLA-DQB2-231ENST00000435145 ABLIM1O14639 778 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 TOM1L1O75674 476 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 DNAJC8O75937 253 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CST3P01034 146 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CALB1P05937 261 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CREB1P16220 341 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 XRCC4Q13426 336 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CCDC142Q17RM4 750 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 PPP1R15BQ5SWA1 713 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 PWWP2AQ96N64 755 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 NSRP1Q9H0G5 558 aaKnown RBP17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 USTQ9Y2C2 406 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 PPP2R3BQ9Y5P8 575 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 GSTA1P08263 222 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CETN2P41208 172 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 TNFSF9P41273 254 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 VPS41P49754 854 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 COPS2P61201 443 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 SEZ6Q53EL9 994 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 SWT1Q5T5J6 900 aaKnown RBP17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CEP128Q6ZU80 1094 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 ANKRD35Q8N283 1001 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CCHCR1Q8TD31 782 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 FAM118BQ9BPY3 351 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 IMPG2Q9BZV3 1241 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 ZNF518BQ9C0D4 1074 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 NIF3L1Q9GZT8 377 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 DNAJC17Q9NVM6 304 aaKnown RBP17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 SAMD15Q9P1V8 674 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 CTNNAL1Q9UBT7 734 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 ACTL7BQ9Y614 415 aa17.03■□□□□ 0.32
HLA-DQB2-231ENST00000435145 TCF4P15884 667 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 BAG6P46379 1132 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 IFNAR2P48551 515 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 STAT5BP51692 787 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 MPP2Q14168 576 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 STAT4Q14765 748 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 FAM160B1Q5W0V3 765 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 RIOX2Q8IUF8 465 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 NIPA2Q8N8Q9 360 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 PRPF31Q8WWY3 499 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 ELAC2Q9BQ52 826 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 MRPL4Q9BYD3 311 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 SLC12A4Q9UP95 1085 aa17.02■□□□□ 0.32
HLA-DQB2-231ENST00000435145 SOWAHBA6NEL2 793 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 SNX3O60493 162 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CDH16O75309 829 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 VIMP08670 466 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CETPP11597 493 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MYL6P60660 151 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 OGDHQ02218 1023 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TAP1Q03518 808 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 NEDD9Q14511 834 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ATP13A4Q4VNC1 1196 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 MFSD7Q6UXD7 560 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CYP4X1Q8N118 509 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 WDTC1Q8N5D0 677 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TRPM4Q8TD43 1214 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CKAP2Q8WWK9 683 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ACO2Q99798 780 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 KLC4Q9NSK0 619 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 CPSF3Q9UKF6 684 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 PCDHGC3Q9UN70 934 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 DRG1Q9Y295 367 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 LRRC37A2A6NM11 1700 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 DNALI1O14645 258 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 OGTO15294 1046 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TJP3O95049 919 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TGFB3P10600 412 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 P3H1Q32P28 736 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 EAPPQ56P03 285 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 TMEM63BQ5T3F8 832 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 IER5Q5VY09 327 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 SPOCD1Q6ZMY3 1216 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 FUKQ8N0W3 1084 aa17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 RIBC1Q8N443 379 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB2-231ENST00000435145 ALLCQ8N6M5 410 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms