RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 RARAP10276 462 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 CYP2C9P11712 490 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 KRT3P12035 628 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
CLDN4-203ENST00000435050 TWF2Q6IBS0 349 aaKnown RBP12.9□□□□□ -0.34
CLDN4-203ENST00000435050 APBB1IPQ7Z5R6 666 aaPredicted RBP12.9□□□□□ -0.34
CLDN4-203ENST00000435050 WDR49Q8IV35 697 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 KIAA0319LQ8IZA0 1049 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 NIFKQ9BYG3 293 aaKnown RBP12.9□□□□□ -0.34
CLDN4-203ENST00000435050 CDT1Q9H211 546 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 ABT1Q9ULW3 272 aaKnown RBP12.9□□□□□ -0.34
CLDN4-203ENST00000435050 PODXLO00592 558 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 MAGEB2O15479 319 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
CLDN4-203ENST00000435050 FLT3P36888 993 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 PMS2P54278 862 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 FEZF2Q8TBJ5 459 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 RSAD2Q8WXG1 361 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 OSBPL8Q9BZF1 889 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 VIMP08670 466 aaKnown RBP12.9□□□□□ -0.34
CLDN4-203ENST00000435050 MYO1EQ12965 1108 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 KRT81Q14533 505 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 JADE1Q6IE81 842 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 PLEKHH3Q7Z736 793 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 KCTD6Q8NC69 237 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 GRK7Q8WTQ7 553 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 RPS6KC1Q96S38 1066 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 TMEM134Q9H6X4 195 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 GDF3Q9NR23 364 aa12.9□□□□□ -0.34
CLDN4-203ENST00000435050 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 DDX3YO15523 660 aaKnown RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 VNN1O95497 513 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 C6orf222P0C671 652 aaPredicted RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 MYBL1P10243 752 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 COILP38432 576 aaPredicted RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 AP3M2P53677 418 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 RPL7AP62424 266 aaKnown RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 DGKDQ16760 1214 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 C11orf63Q6NUN7 778 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 CCDC77Q9BR77 488 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 GCOM2Q9BZD3 368 aaPredicted RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 IP6K2Q9UHH9 426 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 QSER1Q2KHR3 1735 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 M0QZ92 97 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 ASAP2O43150 1006 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 ADORA2BP29275 332 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 IFRD2Q12894 506 aaPredicted RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 GRIK4Q16099 956 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 MINDY3Q9H8M7 445 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 FAM187AA6NFU0 413 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 POC1B-GALNT4F8VUJ3 575 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 PTENP60484 403 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 BEX3Q00994 111 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 GHRHRQ02643 423 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 DHX34Q14147 1143 aaKnown RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 PPP6R3Q5H9R7 873 aaPredicted RBP12.89□□□□□ -0.35
CLDN4-203ENST00000435050 PRUNE1Q86TP1 453 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 HAPLN2Q9GZV7 340 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 MLXIPLQ9NP71 852 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 CHST7Q9NS84 486 aa12.89□□□□□ -0.35
CLDN4-203ENST00000435050 MAP3K6O95382 1288 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 B4GALNT4Q76KP1 1039 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 ZNF677Q86XU0 584 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 MORC4Q8TE76 937 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 NEUROG2Q9H2A3 272 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 STBD1O95210 358 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 AKAP5P24588 427 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 ZNF484Q5JVG2 852 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 DCAF12L1Q5VU92 463 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 DPY19L2P1Q6NXN4 242 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 ZC3H15Q8WU90 426 aaKnown RBP12.88□□□□□ -0.35
CLDN4-203ENST00000435050 FBXL18Q96ME1 805 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 MED10Q9BTT4 135 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 METTL5Q9NRN9 209 aaKnown RBP12.88□□□□□ -0.35
CLDN4-203ENST00000435050 SNTG2Q9NY99 539 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 COQ4Q9Y3A0 265 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 F8VP50 259 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 H7C0C1 242 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 EDN1P05305 212 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 ATP5OP48047 213 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 PRELID2Q8N945 189 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 ATP6V1G3Q96LB4 118 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 FOCADQ5VW36 1801 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 GPR25O00155 361 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 RARBP10826 455 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 SLC26A2P50443 739 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 CRELD2Q6UXH1 353 aaPredicted RBP12.88□□□□□ -0.35
CLDN4-203ENST00000435050 C9orf72Q96LT7 481 aa12.88□□□□□ -0.35
CLDN4-203ENST00000435050 A8MXQ7 604 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 SLC29A2Q14542 456 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 PLPPR4Q7Z2D5 763 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 MSCO60682 206 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms