RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 IER5Q5VY09 327 aa19.73■□□□□ 0.75
CLK1-205ENST00000434813 SMYD5Q6GMV2 418 aa19.73■□□□□ 0.75
CLK1-205ENST00000434813 ZNF606Q8WXB4 792 aa19.73■□□□□ 0.75
CLK1-205ENST00000434813 CHMP6Q96FZ7 201 aa19.73■□□□□ 0.75
CLK1-205ENST00000434813 SELENOSQ9BQE4 189 aa19.73■□□□□ 0.75
CLK1-205ENST00000434813 TRAIPQ9BWF2 469 aa19.73■□□□□ 0.75
CLK1-205ENST00000434813 FSBPO95073 299 aa19.72■□□□□ 0.75
CLK1-205ENST00000434813 DRD4P21917 467 aa19.72■□□□□ 0.75
CLK1-205ENST00000434813 SSTR3P32745 418 aaPredicted RBP19.72■□□□□ 0.75
CLK1-205ENST00000434813 ITGA8P53708 1063 aa19.72■□□□□ 0.75
CLK1-205ENST00000434813 MKRN4PQ13434 485 aaPredicted RBP19.72■□□□□ 0.75
CLK1-205ENST00000434813 NCAPG2Q86XI2 1143 aa19.72■□□□□ 0.75
CLK1-205ENST00000434813 TCP11Q8WWU5 503 aa19.72■□□□□ 0.75
CLK1-205ENST00000434813 BBXQ8WY36 941 aaPredicted RBP19.72■□□□□ 0.75
CLK1-205ENST00000434813 DDX23Q9BUQ8 820 aaKnown RBP19.72■□□□□ 0.75
CLK1-205ENST00000434813 NIF3L1Q9GZT8 377 aa19.72■□□□□ 0.75
CLK1-205ENST00000434813 ABLIM1O14639 778 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 OGTO15294 1046 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 CALB1P05937 261 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 SLCO1A2P46721 670 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 MCL1Q07820 350 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 PPIL2Q13356 520 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 SCARA3Q6AZY7 606 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 TAOK1Q7L7X3 1001 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 ACO2Q99798 780 aaKnown RBP19.71■□□□□ 0.75
CLK1-205ENST00000434813 HEMGNQ9BXL5 484 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 MTMR12Q9C0I1 747 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 CCDC134Q9H6E4 229 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 CLEC11AQ9Y240 323 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 CST3P01034 146 aaPredicted RBP19.71■□□□□ 0.75
CLK1-205ENST00000434813 MXD4Q14582 209 aaPredicted RBP19.71■□□□□ 0.75
CLK1-205ENST00000434813 SURF1Q15526 300 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 GKAP1Q5VSY0 366 aaPredicted RBP19.71■□□□□ 0.75
CLK1-205ENST00000434813 ZBTB8OSQ8IWT0 167 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 CCDC89Q8N998 374 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 BBOF1Q8ND07 529 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 OPTNQ96CV9 577 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 RBM41Q96IZ5 413 aaKnown RBP19.71■□□□□ 0.75
CLK1-205ENST00000434813 SEC16BQ96JE7 1060 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 SCLT1Q96NL6 688 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 TMEM51Q9NW97 253 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 CPSF3Q9UKF6 684 aaKnown RBP19.71■□□□□ 0.75
CLK1-205ENST00000434813 USTQ9Y2C2 406 aa19.71■□□□□ 0.75
CLK1-205ENST00000434813 IGKV6-21A0A0C4DH24 114 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 TCRBV5S1A1TA0A578 114 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 TMEM191CA6NGB0 347 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 LGR5O75473 907 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 PRKCBP05771 671 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 TMEM191BP0C7N4 346 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 CD58P19256 250 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 ADCY8P40145 1251 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 LAMTOR4Q0VGL1 99 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 IFT88Q13099 833 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 TRIP13Q15645 432 aaPredicted RBP19.7■□□□□ 0.74
CLK1-205ENST00000434813 ZBTB33Q86T24 672 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 EXOC8Q8IYI6 725 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 CACNA2D3Q8IZS8 1091 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 SERPINB12Q96P63 405 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 ZNF317Q96PQ6 595 aaPredicted RBP19.7■□□□□ 0.74
CLK1-205ENST00000434813 TCHPQ9BT92 498 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 ANAPC5Q9UJX4 755 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 AGTPBP1Q9UPW5 1226 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 KCNH4Q9UQ05 1017 aa19.7■□□□□ 0.74
CLK1-205ENST00000434813 GJB6O95452 261 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 ACSL3O95573 720 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 TTC4O95801 387 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 CETN2P41208 172 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 MYL6P60660 151 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 MAPK6Q16659 721 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 LY6KQ17RY6 165 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 LRRC38Q5VT99 294 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 ZNF365Q70YC5 407 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 ANKS1BQ7Z6G8 1248 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 CPLX4Q7Z7G2 160 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 GPR20Q99678 358 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 ZNF518BQ9C0D4 1074 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 C2orf40Q9H1Z8 148 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 SCN4AP35499 1836 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 ZBTB42B2RXF5 422 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 PROZP22891 400 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 GJC1P36383 396 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 SSR1P43307 286 aaKnown RBP19.69■□□□□ 0.74
CLK1-205ENST00000434813 RPL7AP62424 266 aaKnown RBP19.69■□□□□ 0.74
CLK1-205ENST00000434813 ZNF252P-AS1Q0IIN9 211 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 NFX1Q12986 1120 aaKnown RBP19.69■□□□□ 0.74
CLK1-205ENST00000434813 DUOXA2Q1HG44 320 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 SGSM1Q2NKQ1 1148 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 FASTKD5Q7L8L6 764 aaKnown RBP19.69■□□□□ 0.74
CLK1-205ENST00000434813 RNF149Q8NC42 400 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 MPHOSPH6Q99547 160 aaKnown RBP19.69■□□□□ 0.74
CLK1-205ENST00000434813 ASCC2Q9H1I8 757 aaPredicted RBP19.69■□□□□ 0.74
CLK1-205ENST00000434813 CISHQ9NSE2 258 aa19.69■□□□□ 0.74
CLK1-205ENST00000434813 INTS9Q9NV88 658 aaKnown RBP19.69■□□□□ 0.74
CLK1-205ENST00000434813 ARIH2O95376 493 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 CDH5P33151 784 aaPredicted RBP19.68■□□□□ 0.74
CLK1-205ENST00000434813 LONRF1Q17RB8 773 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 RNF187Q5TA31 235 aaPredicted RBP19.68■□□□□ 0.74
CLK1-205ENST00000434813 DNAJC24Q6P3W2 148 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 KCNV1Q6PIU1 500 aa19.68■□□□□ 0.74
CLK1-205ENST00000434813 PLPPR4Q7Z2D5 763 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms