RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
NUP50-210ENST00000434760 GPC5P78333 572 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 TWF1Q12792 350 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 MYBPC2Q14324 1141 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 DSTYKQ6XUX3 929 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 TMC8Q8IU68 726 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 HS6ST3Q8IZP7 471 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 CXorf38Q8TB03 319 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 SAAL1Q96ER3 474 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 FAM84AQ96KN4 292 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 PGLYRP2Q96PD5 576 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 ACCSQ96QU6 501 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 RTP3Q9BQQ7 232 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 CORO1BQ9BR76 489 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 CBWD1Q9BRT8 395 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 TRIM9Q9C026 710 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 PANK4Q9NVE7 773 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 DLGAP2Q9P1A6 1054 aa17.05■□□□□ 0.32
NUP50-210ENST00000434760 TFIP11Q9UBB9 837 aaKnown RBP17.05■□□□□ 0.32
NUP50-210ENST00000434760 FAM186AA6NE01 2351 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 GREB1Q4ZG55 1949 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 RIF1Q5UIP0 2472 aaKnown RBP17.04■□□□□ 0.32
NUP50-210ENST00000434760 GVINP1Q7Z2Y8 2422 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 ECI2O75521 394 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 MICAL2O94851 1124 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 IL18RAPO95256 599 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 PTPN2P17706 415 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 GARTP22102 1010 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 PAX3P23760 479 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 HOXD13P35453 343 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 GPR17Q13304 367 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 POSTNQ15063 836 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
NUP50-210ENST00000434760 PHLDB3Q6NSJ2 640 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 CNNM4Q6P4Q7 775 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 USP37Q86T82 979 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
NUP50-210ENST00000434760 HPS3Q969F9 1004 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 BORCS6Q96GS4 357 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 ZNF396Q96N95 335 aaPredicted RBP17.04■□□□□ 0.32
NUP50-210ENST00000434760 FAM213AQ9BRX8 229 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 DDX23Q9BUQ8 820 aaKnown RBP17.04■□□□□ 0.32
NUP50-210ENST00000434760 LRRC3Q9BY71 257 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 CUEDC2Q9H467 287 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 DPP3Q9NY33 737 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 EXOC7Q9UPT5 735 aa17.04■□□□□ 0.32
NUP50-210ENST00000434760 DCHS1Q96JQ0 3298 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 ZNF292O60281 2723 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 CUTAO60888 179 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 EHHADHQ08426 723 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 SCARA3Q6AZY7 606 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 CENPPQ6IPU0 288 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 PDZD4Q76G19 769 aaPredicted RBP17.03■□□□□ 0.32
NUP50-210ENST00000434760 NT5DC4Q86YG4 428 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 MCRS1Q96EZ8 462 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 PLA2G2FQ9BZM2 168 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 PCDHB13Q9Y5F0 798 aa17.03■□□□□ 0.32
NUP50-210ENST00000434760 PTPRJQ12913 1337 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 PROB1E7EW31 1015 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 PRPF6O94906 941 aaKnown RBP17.02■□□□□ 0.32
NUP50-210ENST00000434760 TAF6P49848 677 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 STARD6P59095 220 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 DUSP4Q13115 394 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 FAM78AQ5JUQ0 283 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 TANGO2Q6ICL3 276 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 EPM2AIP1Q7L775 607 aaPredicted RBP17.02■□□□□ 0.32
NUP50-210ENST00000434760 CCDC65Q8IXS2 484 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 C1orf127Q8N9H9 656 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 DTWD2Q8NBA8 298 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 ATAD1Q8NBU5 361 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 LEMD2Q8NC56 503 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 PJA1Q8NG27 643 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 SHKBP1Q8TBC3 707 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 DHX58Q96C10 678 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 ASB16Q96NS5 453 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 FOXQ1Q9C009 403 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 IRF2BPLQ9H1B7 796 aa17.02■□□□□ 0.32
NUP50-210ENST00000434760 RBAKQ9NYW8 714 aaPredicted RBP17.02■□□□□ 0.32
NUP50-210ENST00000434760 GOLGA8IPA6NC78 632 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 SHISA7A6NL88 538 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 GOLGA8JA6NMD2 632 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 EXTL3O43909 919 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 GLULP15104 373 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 ATF6P18850 670 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 NBL1P41271 181 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 MLF2Q15773 248 aaPredicted RBP17.01■□□□□ 0.31
NUP50-210ENST00000434760 ELMOD1Q8N336 334 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 KCNG4Q8TDN1 519 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 ATOH1Q92858 354 aaPredicted RBP17.01■□□□□ 0.31
NUP50-210ENST00000434760 ELSPBP1Q96BH3 223 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 ZSWIM3Q96MP5 696 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 ZNF560Q96MR9 790 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 PYM1Q9BRP8 204 aaKnown RBP17.01■□□□□ 0.31
NUP50-210ENST00000434760 ZCWPW1Q9H0M4 648 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 TMEM206Q9H813 350 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 ASAH2Q9NR71 780 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 HSFX1Q9UBD0 423 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 SIX4Q9UIU6 781 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 DSEQ9UL01 958 aa17.01■□□□□ 0.31
NUP50-210ENST00000434760 ANAPC1Q9H1A4 1944 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms