RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 ANKS6Q68DC2 871 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 Q6ZRM9 215 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 ZBTB46Q86UZ6 589 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 GSPT2Q8IYD1 628 aaKnown RBP7.07□□□□□ -1.28
HDAC9-213ENST00000433709 ANKRD35Q8N283 1001 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 PQLC1Q8N2U9 271 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 STON2Q8WXE9 905 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 ST8SIA2Q92186 375 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 CDK5RAP1Q96SZ6 601 aaKnown RBP7.07□□□□□ -1.28
HDAC9-213ENST00000433709 UHRF1Q96T88 793 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-213ENST00000433709 CPPED1Q9BRF8 314 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-213ENST00000433709 LSM14BQ9BX40 385 aaKnown RBP7.07□□□□□ -1.28
HDAC9-213ENST00000433709 LDAHQ9H6V9 325 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 SIK3Q9Y2K2 1263 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 CICQ96RK0 1608 aaPredicted RBP7.07□□□□□ -1.28
HDAC9-213ENST00000433709 CHD4Q14839 1912 aa7.07□□□□□ -1.28
HDAC9-213ENST00000433709 SOS1Q07889 1333 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 MAPK8IP3Q9UPT6 1336 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 SCN11AQ9UI33 1791 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 MFAP3LO75121 409 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 ALDH1L1O75891 902 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 SNUPNO95149 360 aaKnown RBP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 SNRPA1P09661 255 aaKnown RBP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 HK1P19367 917 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 ZEB1P37275 1124 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 IL6STP40189 918 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 SCNN1GP51170 649 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 APBB1IPQ7Z5R6 666 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 DNAJC10Q8IXB1 793 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 MDGA1Q8NFP4 955 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 ATXN2LQ8WWM7 1075 aaKnown RBP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 EXTL1Q92935 676 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 CHMP4CQ96CF2 233 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 PGBD4Q96DM1 585 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 CEP89Q96ST8 783 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 GPR20Q99678 358 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 PDCD2LQ9BRP1 358 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 CPEB1Q9BZB8 566 aaKnown RBP7.06□□□□□ -1.28
HDAC9-213ENST00000433709 SERPINB13Q9UIV8 391 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 TESMINQ9Y4I5 508 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 CEMIPQ8WUJ3 1361 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 HEG1Q9ULI3 1381 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 TUBGCP6Q96RT7 1819 aa7.06□□□□□ -1.28
HDAC9-213ENST00000433709 NPHP1O15259 732 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 ZRANB2O95218 330 aaKnown RBP eCLIP7.05□□□□□ -1.28
HDAC9-213ENST00000433709 TM4SF1P30408 202 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 WASP42768 502 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 RECQLP46063 649 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-213ENST00000433709 RABGGTBP53611 331 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 SLC39A6Q13433 755 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 CNGB1Q14028 1251 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-213ENST00000433709 TAF7Q15545 349 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-213ENST00000433709 C1QL3Q5VWW1 255 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 CLEC4GQ6UXB4 293 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 PDZD4Q76G19 769 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-213ENST00000433709 FAM83AQ86UY5 434 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 IL17REQ8NFR9 667 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 CHMP4AQ9BY43 222 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 AASDHPPTQ9NRN7 309 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 LIMCH1Q9UPQ0 1083 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 HDAC5Q9UQL6 1122 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 GIT1Q9Y2X7 761 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 PCDHA13Q9Y5I0 950 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 COL15A1P39059 1388 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 ATRNL1Q5VV63 1379 aa7.05□□□□□ -1.28
HDAC9-213ENST00000433709 COL3A1P02461 1466 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 C10orf71Q711Q0 1435 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 H0YIN7 160 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 IPO13O94829 963 aaKnown RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 ENDOD1O94919 500 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 EDNRBP24530 442 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 SLC16A1P53985 500 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 EIF5P55010 431 aaKnown RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 C1QTNF8P60827 252 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 RRP1BQ14684 758 aaKnown RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 TTF1Q15361 905 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 CSRP2Q16527 193 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 ZNF572Q7Z3I7 529 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 SPRED1Q7Z699 444 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 SLC35B2Q8TB61 432 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 CCHCR1Q8TD31 782 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 SH3RF3Q8TEJ3 882 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 COA7Q96BR5 231 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 HOOK2Q96ED9 719 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 C7orf25Q9BPX7 421 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 GPR87Q9BY21 358 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 SENP6Q9GZR1 1112 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 KCNH6Q9H252 994 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 BABAM1Q9NWV8 329 aa7.04□□□□□ -1.28
HDAC9-213ENST00000433709 SAP30BPQ9UHR5 308 aaKnown RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 AJAP1Q9UKB5 411 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 LUC7L2Q9Y383 392 aaKnown RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 COL5A3P25940 1745 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-213ENST00000433709 ADAMTS7Q9UKP4 1686 aa7.03□□□□□ -1.28
HDAC9-213ENST00000433709 CCDC154A6NI56 674 aa7.03□□□□□ -1.28
HDAC9-213ENST00000433709 FAM171A2A8MVW0 826 aa7.03□□□□□ -1.28
HDAC9-213ENST00000433709 POLRMTO00411 1230 aaKnown RBP7.03□□□□□ -1.28
HDAC9-213ENST00000433709 HTRA2O43464 458 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-213ENST00000433709 SERPINB2P05120 415 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms