RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 RXFP1Q9HBX9 757 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 RWDD2AQ9UIY3 292 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 CD207Q9UJ71 328 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 TCF20Q9UGU0 1960 aaKnown RBP16.68■□□□□ 0.26
TREX1-201ENST00000433541 IKBKBO14920 756 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 GLP2RO95838 553 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 TYMPP19971 482 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 ELF1P32519 619 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 AARSP49588 968 aaKnown RBP eCLIP16.68■□□□□ 0.26
TREX1-201ENST00000433541 MYL6P60660 151 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 MRPS5P82675 430 aaKnown RBP16.68■□□□□ 0.26
TREX1-201ENST00000433541 DLX2Q07687 328 aaPredicted RBP16.68■□□□□ 0.26
TREX1-201ENST00000433541 LIN9Q5TKA1 542 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 VN1R2Q8NFZ6 395 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
TREX1-201ENST00000433541 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 METTL14Q9HCE5 456 aaKnown RBP16.68■□□□□ 0.26
TREX1-201ENST00000433541 MAN1C1Q9NR34 630 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 DZANK1Q9NVP4 752 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
TREX1-201ENST00000433541 FBXL5Q9UKA1 691 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 BACE2Q9Y5Z0 518 aa16.68■□□□□ 0.26
TREX1-201ENST00000433541 TGM5O43548 720 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
TREX1-201ENST00000433541 CCDC192P0DO97 292 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 MXI1P50539 228 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 STX1AQ16623 288 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 CTC1Q2NKJ3 1217 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 WDR72Q3MJ13 1102 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 RARS2Q5T160 578 aaKnown RBP16.67■□□□□ 0.26
TREX1-201ENST00000433541 WSCD1Q658N2 575 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 ANKRD54Q6NXT1 300 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 FILIP1Q7Z7B0 1213 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.67■□□□□ 0.26
TREX1-201ENST00000433541 TMEM63CQ9P1W3 806 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 FAM50BQ9Y247 325 aa16.67■□□□□ 0.26
TREX1-201ENST00000433541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.66■□□□□ 0.26
TREX1-201ENST00000433541 OR6C75A6NL08 312 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 PRRG1O14668 218 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 ADAM12O43184 909 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 GNA14O95837 355 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 P4HA1P13674 534 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 ATICP31939 592 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 CLDN10P78369 228 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 ROR1Q01973 937 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 PPP3CAQ08209 521 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 ZACNQ401N2 412 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 ZNF667Q5HYK9 610 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 KRT39Q6A163 491 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 SCARA3Q6AZY7 606 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 CES5AQ6NT32 575 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 SCARA5Q6ZMJ2 495 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 FRMD5Q7Z6J6 570 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 ADGRF2Q8IZF7 708 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 KREMEN2Q8NCW0 462 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 SLC22A17Q8WUG5 538 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 ATXN2LQ8WWM7 1075 aaKnown RBP16.66■□□□□ 0.26
TREX1-201ENST00000433541 OXCT2Q9BYC2 517 aaPredicted RBP16.66■□□□□ 0.26
TREX1-201ENST00000433541 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
TREX1-201ENST00000433541 SFXN1Q9H9B4 322 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 TMEM8AQ9HCN3 771 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 ANO10Q9NW15 660 aa16.66■□□□□ 0.26
TREX1-201ENST00000433541 MAGEC2Q9UBF1 373 aaPredicted RBP16.66■□□□□ 0.26
TREX1-201ENST00000433541 OAZ2O95190 189 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 C4BPAP04003 597 aaKnown RBP16.65■□□□□ 0.26
TREX1-201ENST00000433541 CYP11A1P05108 521 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 OR4Q2P0C623 313 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 HOXB8P17481 243 aaPredicted RBP16.65■□□□□ 0.26
TREX1-201ENST00000433541 GTF2H1P32780 548 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 LTBRP36941 435 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 KCNQ1P51787 676 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 MYL7Q01449 175 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 TSPY1Q01534 308 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 RAB33AQ14088 237 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 SGSM1Q2NKQ1 1148 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 LEXMQ3ZCV2 418 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 PPM1LQ5SGD2 360 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 PTCRAQ6ISU1 281 aaPredicted RBP16.65■□□□□ 0.26
TREX1-201ENST00000433541 FOXR2Q6PJQ5 311 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 RSPO2Q6UXX9 243 aaPredicted RBP16.65■□□□□ 0.26
TREX1-201ENST00000433541 TMC5Q6UXY8 1006 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 ZC3H3Q8IXZ2 948 aaKnown RBP16.65■□□□□ 0.26
TREX1-201ENST00000433541 TMEM86AQ8N2M4 240 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 PDCL2Q8N4E4 241 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 TOP6BLQ8N6T0 577 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 C12orf76Q8N812 135 aaPredicted RBP16.65■□□□□ 0.26
TREX1-201ENST00000433541 CXorf38Q8TB03 319 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 PGLYRP2Q96PD5 576 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 SNX25Q9H3E2 840 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 PLEKHA4Q9H4M7 779 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 PIDD1Q9HB75 910 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 GDAP2Q9NXN4 497 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 CLEC1BQ9P126 229 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 L1RE1Q9UN81 338 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 POLIQ9UNA4 740 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 C2orf16Q68DN1 1984 aa16.65■□□□□ 0.26
TREX1-201ENST00000433541 VNN1O95497 513 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms