RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 PTPN4P29074 926 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 STX2P32856 288 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 MCL1Q07820 350 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 ORC2Q13416 577 aaPredicted RBP8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 ZRSR2Q15696 482 aaKnown RBP8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 LONRF1Q17RB8 773 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 C1orf53Q5VUE5 145 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 CYFIP1Q7L576 1253 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 OTUD6AQ7L8S5 288 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 DNAAF5Q86Y56 855 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 SYCP3Q8IZU3 236 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 ANKRD42Q8N9B4 389 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 STKLD1Q8NE28 680 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 GLIS3Q8NEA6 775 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 DNERQ8NFT8 737 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 GDAP1Q8TB36 358 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 RFFLQ8WZ73 363 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 GPKOWQ92917 476 aaPredicted RBP eCLIP8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 PITPNM3Q9BZ71 974 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 METTL14Q9HCE5 456 aaKnown RBP8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 PREBQ9HCU5 417 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 GPCPD1Q9NPB8 672 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 DDX43Q9NXZ2 648 aaKnown RBP8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 Q9Y3F1 56 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 ACTL7BQ9Y614 415 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 COMMD3-BMI1R4GMX3 469 aa8.17□□□□□ -1.1
CNKSR3-202ENST00000433165 ZNF536O15090 1300 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 DDX3XO00571 662 aaKnown RBP eCLIP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 HGSO14964 777 aaPredicted RBP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 CABYRO75952 493 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 PGK2P07205 417 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 BRAFP15056 766 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 CTNNA2P26232 953 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 CST5P28325 142 aaPredicted RBP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 SCNN1BP51168 640 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 KHDC1Q4VXA5 237 aaKnown RBP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 BRDTQ58F21 947 aaPredicted RBP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 PPP1R21Q6ZMI0 780 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 LRRC74BQ6ZQY2 392 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 RGS9BPQ6ZS82 235 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 DYMQ7RTS9 669 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 ZC3H18Q86VM9 953 aaKnown RBP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 VPS36Q86VN1 386 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 PNMA5Q96PV4 448 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 CDC42EP4Q9H3Q1 356 aaKnown RBP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 HOMER2Q9NSB8 354 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 LARSQ9P2J5 1176 aaKnown RBP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 CIDEBQ9UHD4 219 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 LGALS13Q9UHV8 139 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 MTMR7Q9Y216 660 aa8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
CNKSR3-202ENST00000433165 CYP1A1P04798 512 aaPredicted RBP8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 ZNF865P0CJ78 1059 aaPredicted RBP8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 SMARCA1P28370 1054 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 FOXN2P32314 431 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 TECP42680 631 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 GALCP54803 685 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 JAM2P57087 298 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 SLC34A1Q06495 639 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 AP1B1Q10567 949 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 KCNH2Q12809 1159 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 LRRC41Q15345 812 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 CCDC6Q16204 474 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 IQSEC1Q6DN90 963 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 RNF207Q6ZRF8 634 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 ARMCX2Q7L311 632 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 PRELID2Q8N945 189 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 OLIG1Q8TAK6 271 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 DDX12PQ92771 950 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 C18orf8Q96DM3 657 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 AGBL1Q96MI9 1066 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 PPP1R12CQ9BZL4 782 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 LRRC27Q9C0I9 530 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 MLXIPLQ9NP71 852 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 KCNK9Q9NPC2 374 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 SAR1AQ9NR31 198 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 RIPK3Q9Y572 518 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 CETN3O15182 167 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 GGPS1O95749 300 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 LYNP07948 512 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 TMEM253P0C7T8 217 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 CCDC166P0CW27 439 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 BMP8BP34820 402 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 PRPF4BQ13523 1007 aaKnown RBP8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 RCN1Q15293 331 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 CYP1B1Q16678 543 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 LIN52Q52LA3 116 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 ZC2HC1CQ53FD0 456 aaPredicted RBP8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 NSMFQ6X4W1 530 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 FBXO11Q86XK2 927 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 TRPV1Q8NER1 839 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 SLC30A5Q8TAD4 765 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 MORC4Q8TE76 937 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 C10orf82Q8WW14 230 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 RAD54LQ92698 747 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 IWS1Q96ST2 819 aa8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 ZNF184Q99676 751 aaPredicted RBP8.15□□□□□ -1.1
CNKSR3-202ENST00000433165 SPZ1Q9BXG8 430 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms