RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 GTF2H3Q13889 308 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 SLC44A4Q53GD3 710 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 CENPPQ6IPU0 288 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 MTHFD1LQ6UB35 978 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 VMP1Q96GC9 406 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 PTPRHQ9HD43 1115 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 SMG5Q9UPR3 1016 aaKnown RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 CCT8L1PA6NM43 557 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 TWF1Q12792 350 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 P3H2Q8IVL5 708 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 LRRC34Q8IZ02 419 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 CENPTQ96BT3 561 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 QTRT2Q9H974 415 aaKnown RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 BSDC1Q9NW68 430 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 AP3B1O00203 1094 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 UPP2O95045 317 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 PDHBP11177 359 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 OTUD4Q01804 1114 aaKnown RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 JADE3Q92613 823 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 KCNK16Q96T55 309 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 SEPT5Q99719 369 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 SCAF8Q9UPN6 1271 aaKnown RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 ZDHHC9Q9Y397 364 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 KLHL18O94889 574 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 ALBP02768 609 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 HSMCR30P0CW71 290 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 GNAT1P11488 350 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 CDH2P19022 906 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 COMTP21964 271 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 HSD17B4P51659 736 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 NCALDP61601 193 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 AMHR2Q16671 573 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 DUOXA2Q1HG44 320 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 RCSD1Q6JBY9 416 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 UTS2BQ765I0 119 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 JAMLQ86YT9 394 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 SLC7A14Q8TBB6 771 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 DONSONQ9NYP3 566 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 TMA7Q9Y2S6 64 aaKnown RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 STK36Q9NRP7 1315 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 BBOX1O75936 387 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 PRKCBP05771 671 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 SKIV2LQ15477 1246 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 PGS1Q32NB8 556 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 CCDC149Q6ZUS6 474 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 C18orf8Q96DM3 657 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 FAM111AQ96PZ2 611 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 COQ7Q99807 217 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 PLA2G4FQ68DD2 849 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 PTRHD1Q6GMV3 140 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 LRIG3Q6UXM1 1119 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 MXD3Q9BW11 206 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 TBC1D22BQ9NU19 505 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 APEX2Q9UBZ4 518 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 RASSF9O75901 435 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 RPS7P62081 194 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 ATP1A4Q13733 1029 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 FRMD5Q7Z6J6 570 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 CLEC10AQ8IUN9 316 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 NOA1Q8NC60 698 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 FAM167AQ96KS9 214 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 PGK2P07205 417 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 CHRM3P20309 590 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 AKIRIN2Q53H80 203 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 C2CD6Q53TS8 623 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 RAD9BQ6WBX8 426 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 DENND5BQ6ZUT9 1274 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 FLAD1Q8NFF5 587 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 NSUN6Q8TEA1 469 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 REEP2Q9BRK0 252 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 TCOF1Q13428 1488 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 ZNF23P17027 643 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 GLRBP48167 497 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 RAB14P61106 215 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 SLC29A2Q14542 456 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 PIGBQ92521 554 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 E2F7Q96AV8 911 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 SPASTQ9UBP0 616 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 LCMT1Q9UIC8 334 aa11.93□□□□□ -0.5
SEC16A-206ENST00000431893 MTO1Q9Y2Z2 717 aaKnown RBP11.93□□□□□ -0.5
SEC16A-206ENST00000431893 CDC16Q13042 620 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 PTGISQ16647 500 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 MFSD4BQ5TF39 518 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 FAM117BQ6P1L5 589 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 SMIM5Q71RC9 77 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 RAB42Q8N4Z0 105 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 CMTM5Q96DZ9 223 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 CALR3Q96L12 384 aaKnown RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 THUMPD3Q9BV44 507 aaKnown RBP11.92□□□□□ -0.5
SEC16A-206ENST00000431893 PRR23AA6NEV1 266 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 RARBP10826 455 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 POU1F1P28069 291 aa11.92□□□□□ -0.5
SEC16A-206ENST00000431893 PBLDP30039 288 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms