RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 PARP6Q2NL67 630 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 C9orf131Q5VYM1 1079 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 DENND1AQ8TEH3 1009 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 CLEC4DQ8WXI8 215 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 BSNDQ8WZ55 320 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 TTC25Q96NG3 672 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 TMEM237Q96Q45 408 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 GLIS2Q9BZE0 524 aaPredicted RBP15.89■□□□□ 0.13
LINC00839-202ENST00000429940 KIF9Q9HAQ2 790 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 MRPL47Q9HD33 250 aaKnown RBP15.89■□□□□ 0.13
LINC00839-202ENST00000429940 DNALI1O14645 258 aaPredicted RBP15.89■□□□□ 0.13
LINC00839-202ENST00000429940 KRT15P19012 456 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 CCNG1P51959 295 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 SOX10P56693 466 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 MAMLD1Q13495 774 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 MOGSQ13724 837 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 WDR44Q5JSH3 913 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 HP1BP3Q5SSJ5 553 aaPredicted RBP15.89■□□□□ 0.13
LINC00839-202ENST00000429940 SMC6Q96SB8 1091 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 SLCO1B3Q9NPD5 702 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 KLHL11Q9NVR0 708 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 HAO1Q9UJM8 370 aa15.89■□□□□ 0.13
LINC00839-202ENST00000429940 DICER1Q9UPY3 1922 aaKnown RBP15.89■□□□□ 0.13
LINC00839-202ENST00000429940 WDR64B1ANS9 1081 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 LIASO43766 372 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 DCTN3O75935 186 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 CCNE2O96020 404 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 CFHP08603 1231 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 EIF2AK2P19525 551 aaKnown RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 CDC25CP30307 473 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 ALDH3A1P30838 453 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 DSG3P32926 999 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 JAK3P52333 1124 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 PKN2Q16513 984 aaKnown RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 KAZNQ674X7 775 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 LMBRD2Q68DH5 695 aaPredicted RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 ANO5Q75V66 913 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 TDRPQ86YL5 185 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 MCF2L2Q86YR7 1114 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 AGGF1Q8N302 714 aaeCLIP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 GLIS1Q8NBF1 620 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 KCNV2Q8TDN2 545 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 ZNF516Q92618 1163 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 BICD1Q96G01 975 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 GRID1Q9ULK0 1009 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 SMG5Q9UPR3 1016 aaKnown RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 ATP9AO75110 1047 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 SKAP2O75563 359 aaPredicted RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 ZSCAN5DPP0CG00 497 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 KRT10P13645 584 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 SSTR3P32745 418 aaPredicted RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 RPA3P35244 121 aaPredicted RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 CETN2P41208 172 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 SLC18A1P54219 525 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 NFX1Q12986 1120 aaKnown RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 FASTKD3Q14CZ7 662 aaKnown RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 PDK4Q16654 411 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 C15orf39Q6ZRI6 1047 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 RGS9BPQ6ZS82 235 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 CAPN12Q6ZSI9 719 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 C4orf33Q8N1A6 199 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 LRRC8CQ8TDW0 803 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 SPIRE2Q8WWL2 714 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 ZBED3Q96IU2 234 aaPredicted RBP15.88■□□□□ 0.13
LINC00839-202ENST00000429940 VPS37BQ9H9H4 285 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 DNPEPQ9ULA0 475 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 ZNF148Q9UQR1 794 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 CNTNAP1P78357 1384 aa15.88■□□□□ 0.13
LINC00839-202ENST00000429940 PI4K2BG5E9Z4 385 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 EDF1O60869 148 aaKnown RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 MYCLP12524 364 aaPredicted RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 PECAM1P16284 738 aaPredicted RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 CA4P22748 312 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 ARSEP51690 589 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 ZNF280AP59817 542 aaPredicted RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 ZFYVE27Q5T4F4 411 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 PRAMEF18Q5VWM3 479 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 CPXCR1Q8N123 301 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 FAM151AQ8WW52 585 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 INPP5DQ92835 1189 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 NTPCRQ9BSD7 190 aaKnown RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 KIAA1683Q9H0B3 1180 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 SENP1Q9P0U3 644 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 NKX1-2Q9UD57 310 aaPredicted RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 SCINQ9Y6U3 715 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 ATF7P17544 494 aaPredicted RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 GARTP22102 1010 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 SFNP31947 248 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 PIK3CAP42336 1068 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 NOMO3P69849 1222 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 GPS1Q13098 491 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 TAF11Q15544 211 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 EAPPQ56P03 285 aaPredicted RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 BRDTQ58F21 947 aaPredicted RBP15.87■□□□□ 0.13
LINC00839-202ENST00000429940 SPOPLQ6IQ16 392 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 TRIM72Q6ZMU5 477 aa15.87■□□□□ 0.13
LINC00839-202ENST00000429940 TRPM4Q8TD43 1214 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms