RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TMPRSS6Q8IU80 811 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 SYNE4Q8N205 404 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 LSMEM1Q8N8F7 131 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 GIMAP8Q8ND71 665 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PSD2Q9BQI7 771 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 NUF2Q9BZD4 464 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 B3GNT4Q9C0J1 378 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 ARMC7Q9H6L4 198 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 ARL8BQ9NVJ2 186 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 COMMD8Q9NX08 183 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PPM1HQ9ULR3 514 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 IVNS1ABPQ9Y6Y0 642 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 MYH3P11055 1940 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 COL16A1Q07092 1604 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 ATP8B3O60423 1300 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PLCH1Q4KWH8 1693 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 NUP98P52948 1817 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 FAM47DPA6NHR8 397 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 RSPH10B2B2RC85 870 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 H3BNX3 289 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZNF701M0R085 212 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PODXLO00592 558 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 EPHB6O15197 1021 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 CRYZL1O95825 349 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 CSF1RP07333 972 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 TFPTP0C1Z6 253 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 RSPH10BP0C881 870 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 M6PRP20645 277 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 CCNE1P24864 410 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 ADORA1P30542 326 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 CETN2P41208 172 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 WDR4P57081 412 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 KRT76Q01546 638 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 FOLH1Q04609 750 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 DNAJC3Q13217 504 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 IFIT5Q13325 482 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 SF3B4Q15427 424 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PDK4Q16654 411 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 TDRD12Q587J7 1177 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 APOA5Q6Q788 366 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PDZD8Q8NEN9 1154 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 HCAR2Q8TDS4 363 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 ACTRT2Q8TDY3 377 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 STAMQ92783 540 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 TMA16Q96EY4 203 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 C8orf48Q96LL4 319 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 CEP63Q96MT8 703 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 LBHD1Q9BQE6 289 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 NUP85Q9BW27 656 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PLA2G12BQ9BX93 195 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 TMOD3Q9NYL9 352 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 DSEQ9UL01 958 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 B3GNT3Q9Y2A9 372 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 SQORQ9Y6N5 450 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLIT2O94813 1529 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 FRMPD4Q14CM0 1322 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 HAT1O14929 419 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 TM7SF2O76062 418 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 TTLL1O95922 423 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 P4HA1P13674 534 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 IL4RP24394 825 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 AQP4P55087 323 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 ATP6V0D1P61421 351 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 CHRNEQ04844 493 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 MAPK7Q13164 816 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SCARF1Q14162 830 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 RRP1BQ14684 758 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 EPHA7Q15375 998 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SF3B3Q15393 1217 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 LONRF1Q17RB8 773 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 EDRF1Q3B7T1 1238 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 CLEC4GQ6UXB4 293 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 C4orf22Q6V702 233 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 KYAT3Q6YP21 454 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 TMC7Q7Z402 723 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 JAMLQ86YT9 394 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 ICA1LQ8NDH6 482 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 ANGPTL6Q8NI99 470 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 FAM89AQ96GI7 184 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 HES6Q96HZ4 224 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 FAM161BQ96MY7 647 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 PANX3Q96QZ0 392 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 PLVAPQ9BX97 442 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SNX25Q9H3E2 840 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 S100A14Q9HCY8 104 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 UBN1Q9NPG3 1134 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 FAM207AQ9NSI2 230 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 ARMCX3Q9UH62 379 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 CDH7Q9ULB5 785 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 NEU2Q9Y3R4 380 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 SCINQ9Y6U3 715 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 CASQ2O14958 399 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 B4GALT4O60513 344 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 GUCY1B2O75343 617 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 RHOBTB3O94955 611 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 PCCAP05165 728 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 THRAP10827 490 aa9.32□□□□□ -0.92
CDC42BPA-206ENST00000429440 IFNAR1P17181 557 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms