RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 C18orf25Q96B23 403 aaPredicted RBP9.87□□□□□ -0.83
SMC1A-203ENST00000428014 BORCS6Q96GS4 357 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 MFSD14AQ96MC6 490 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 CBWD1Q9BRT8 395 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 MKNK1Q9BUB5 465 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 KCTD10Q9H3F6 313 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 GOLGA2P5Q9HBQ8 144 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 ABCB6Q9NP58 842 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 INTS13Q9NVM9 706 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 DPP3Q9NY33 737 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 HSPBP1Q9NZL4 362 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 TUBGCP4Q9UGJ1 667 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 FBXL5Q9UKA1 691 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 PCDHGA4Q9Y5G9 962 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 CDY1Q9Y6F8 540 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 DOCK8Q8NF50 2099 aa9.87□□□□□ -0.83
SMC1A-203ENST00000428014 CLUHO75153 1309 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 CCDC195A0A1B0GUA6 201 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 KPNA7A9QM74 516 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 C2CD2LO14523 706 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 RPN1P04843 607 aaKnown RBP9.86□□□□□ -0.83
SMC1A-203ENST00000428014 C8AP07357 584 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 NFICP08651 508 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 HARSP12081 509 aaKnown RBP9.86□□□□□ -0.83
SMC1A-203ENST00000428014 RPL13P26373 211 aaKnown RBP9.86□□□□□ -0.83
SMC1A-203ENST00000428014 WEE1P30291 646 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 ATICP31939 592 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 SSTR3P32745 418 aaPredicted RBP9.86□□□□□ -0.83
SMC1A-203ENST00000428014 BRCC3P46736 316 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 PLXNA3P51805 1871 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 RBP5P82980 135 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 MYO1EQ12965 1108 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 SNW1Q13573 536 aaKnown RBP9.86□□□□□ -0.83
SMC1A-203ENST00000428014 SNRNP35Q16560 246 aaKnown RBP9.86□□□□□ -0.83
SMC1A-203ENST00000428014 PTPN21Q16825 1174 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 KMT5BQ4FZB7 885 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 PPM1LQ5SGD2 360 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 ZBTB41Q5SVQ8 909 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 OVOS1Q6IE37 1185 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 CEP57Q86XR8 500 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 RNF135Q8IUD6 432 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 EFCAB13Q8IY85 973 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 C1orf127Q8N9H9 656 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 FSIP1Q8NA03 581 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 TDRD5Q8NAT2 981 aaKnown RBP9.86□□□□□ -0.83
SMC1A-203ENST00000428014 KIAA0895Q8NCT3 520 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 SMG7Q92540 1137 aaKnown RBP9.86□□□□□ -0.83
SMC1A-203ENST00000428014 EDAQ92838 391 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 ANKRD36BP1Q96IX9 119 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 SENP8Q96LD8 212 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 ACBD6Q9BR61 282 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 FAM213AQ9BRX8 229 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 GPR88Q9GZN0 384 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 POMKQ9H5K3 350 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 CD320Q9NPF0 282 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 GDE1Q9NZC3 331 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 CHMP5Q9NZZ3 219 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 SORCS3Q9UPU3 1222 aa9.86□□□□□ -0.83
SMC1A-203ENST00000428014 SCN1AP35498 2009 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 WDR27A2RRH5 827 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 ZNF197O14709 1029 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 GABRDO14764 452 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 SNPHO15079 494 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 CALUO43852 315 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 SMC2O95347 1197 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 TNNC2P02585 160 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 ELF1P32519 619 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 CA8P35219 290 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 AFMP43652 599 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 LHX1P48742 406 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 TUFMP49411 452 aaKnown RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 RBM10P98175 930 aaKnown RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 CYP24A1Q07973 514 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 SIGLEC14Q08ET2 396 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 STK4Q13043 487 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 MAPRE1Q15691 268 aaKnown RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 NFE2Q16621 373 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 CTXN3Q4LDR2 81 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 SEZ6Q53EL9 994 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 RARS2Q5T160 578 aaKnown RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 FOXD4L5Q5VV16 416 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 LLGL2Q6P1M3 1020 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 PRSS55Q6UWB4 352 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 DSTYKQ6XUX3 929 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 METTL23Q86XA0 190 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 THEM5Q8N1Q8 247 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 SPPL2BQ8TCT7 592 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 HASPINQ8TF76 798 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 FOXD4L4Q8WXT5 416 aaPredicted RBP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 TAF4BQ92750 862 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 FUBP3Q96I24 572 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMC1A-203ENST00000428014 CGRRF1Q99675 332 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 PRRX2Q99811 253 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 FGFBP2Q9BYJ0 223 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 TECTAO75443 2155 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 ZDBF2Q9HCK1 2354 aa9.85□□□□□ -0.83
SMC1A-203ENST00000428014 C2orf16Q68DN1 1984 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 TISP43B9A030 160 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 ANHXE9PGG2 379 aa9.84□□□□□ -0.83
SMC1A-203ENST00000428014 TACC1O75410 805 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms