RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TNIP2Q8NFZ5 429 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ELMO2Q96JJ3 720 aa6□□□□□ -1.45
HERC4-206ENST00000427635 CRAMP1Q96RY5 1269 aa6□□□□□ -1.45
HERC4-206ENST00000427635 TACO1Q9BSH4 297 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 RNF208Q9H0X6 261 aa6□□□□□ -1.45
HERC4-206ENST00000427635 OSGEPL1Q9H4B0 414 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ZBTB40Q9NUA8 1239 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ZNF70Q9UC06 446 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 ATP6V1HQ9UI12 483 aa6□□□□□ -1.45
HERC4-206ENST00000427635 NAGPAQ9UK23 515 aa6□□□□□ -1.45
HERC4-206ENST00000427635 A0A1B0GW55 424 aa6□□□□□ -1.45
HERC4-206ENST00000427635 KCNQ3O43525 872 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ALDH2P05091 517 aa6□□□□□ -1.45
HERC4-206ENST00000427635 CKMP06732 381 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DUX4L2P0CJ85 424 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DUX4L3P0CJ86 424 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DUX4L4P0CJ87 422 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DUX4L5P0CJ88 424 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DUX4L6P0CJ89 424 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DUX4L7P0CJ90 424 aa6□□□□□ -1.45
HERC4-206ENST00000427635 GPR1P46091 355 aa6□□□□□ -1.45
HERC4-206ENST00000427635 TGFB2P61812 414 aa6□□□□□ -1.45
HERC4-206ENST00000427635 AP2B1P63010 937 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DMPKQ09013 629 aa6□□□□□ -1.45
HERC4-206ENST00000427635 USP39Q53GS9 565 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 RD3Q7Z3Z2 195 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ZBED8Q8IZ13 594 aa6□□□□□ -1.45
HERC4-206ENST00000427635 SCFD2Q8WU76 684 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ZFPM2Q8WW38 1151 aa6□□□□□ -1.45
HERC4-206ENST00000427635 E2F7Q96AV8 911 aa6□□□□□ -1.45
HERC4-206ENST00000427635 KCNS3Q9BQ31 491 aa6□□□□□ -1.45
HERC4-206ENST00000427635 LDHAL6BQ9BYZ2 381 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 MIR1-1HGQ9H1L0 117 aa6□□□□□ -1.45
HERC4-206ENST00000427635 HAUS4Q9H6D7 363 aa6□□□□□ -1.45
HERC4-206ENST00000427635 MED4Q9NPJ6 270 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ARHGEF38Q9NXL2 777 aa6□□□□□ -1.45
HERC4-206ENST00000427635 DUX4Q9UBX2 424 aa6□□□□□ -1.45
HERC4-206ENST00000427635 CNOT8Q9UFF9 292 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 RUVBL2Q9Y230 463 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 PNMA6EA0A0J9YXQ4 647 aa6□□□□□ -1.45
HERC4-206ENST00000427635 WDR91A4D1P6 747 aa6□□□□□ -1.45
HERC4-206ENST00000427635 PRR23D1E9PI22 279 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 ZBTB7BO15156 539 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 PRR23D2P0DMB1 279 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 PLCG1P19174 1290 aa6□□□□□ -1.45
HERC4-206ENST00000427635 LTKP29376 864 aa6□□□□□ -1.45
HERC4-206ENST00000427635 CUL4AQ13619 759 aa6□□□□□ -1.45
HERC4-206ENST00000427635 TCEAL5Q5H9L2 206 aa6□□□□□ -1.45
HERC4-206ENST00000427635 RASEFQ8IZ41 740 aa6□□□□□ -1.45
HERC4-206ENST00000427635 PABPC5Q96DU9 382 aaKnown RBP6□□□□□ -1.45
HERC4-206ENST00000427635 CAMKK2Q96RR4 588 aa6□□□□□ -1.45
HERC4-206ENST00000427635 TESK2Q96S53 571 aa6□□□□□ -1.45
HERC4-206ENST00000427635 OSBPL9Q96SU4 736 aa6□□□□□ -1.45
HERC4-206ENST00000427635 MTG1Q9BT17 334 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 ADI1Q9BV57 179 aa6□□□□□ -1.45
HERC4-206ENST00000427635 PARVAQ9NVD7 372 aa6□□□□□ -1.45
HERC4-206ENST00000427635 UXTQ9UBK9 157 aaPredicted RBP6□□□□□ -1.45
HERC4-206ENST00000427635 TNFSF13BQ9Y275 285 aa6□□□□□ -1.45
HERC4-206ENST00000427635 VPS9D1Q9Y2B5 631 aa6□□□□□ -1.45
HERC4-206ENST00000427635 ZNF839A8K0R7 811 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 NKRFO15226 690 aaKnown RBP eCLIP5.99□□□□□ -1.45
HERC4-206ENST00000427635 ATP9BO43861 1147 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 SERPINI2O75830 405 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 YWHABP31946 246 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 HALP42357 657 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CD151P48509 253 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ALDH18A1P54886 795 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 NPEPPSP55786 919 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ALDH6A1Q02252 535 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 OCA2Q04671 838 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ZNF211Q13398 564 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 EFCAB12Q6NXP0 572 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 LDHDQ86WU2 507 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 TM6SF1Q9BZW5 370 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CIPCQ9C0C6 399 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 WDR41Q9HAD4 459 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 FANCLQ9NW38 375 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 NSMCE4AQ9NXX6 385 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 MRFAP1Q9Y605 127 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 STMND1H3BQB6 276 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 KCNQ2O43526 872 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 HS6ST1O60243 411 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 EIF2S1P05198 315 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 HOXC6P09630 235 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CHI3L1P36222 383 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 NUP62P37198 522 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 BCAR1P56945 870 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 GUCY2DQ02846 1103 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 DHX9Q08211 1270 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 ELAVL2Q12926 359 aaKnown RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 CCNG2Q16589 344 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 CTXN3Q4LDR2 81 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 ZMYM1Q5SVZ6 1142 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 SLC44A2Q8IWA5 706 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 ZNF655Q8N720 491 aaPredicted RBP5.99□□□□□ -1.45
HERC4-206ENST00000427635 SCAIQ8N9R8 606 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 POMGNT2Q8NAT1 580 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 RFWD2Q8NHY2 731 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 DDI1Q8WTU0 396 aa5.99□□□□□ -1.45
HERC4-206ENST00000427635 COG1Q8WTW3 980 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms