RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 PSMA7O14818 248 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 TMEM191BP0C7N4 346 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 TNNI1P19237 187 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 POLR2BP30876 1174 aaKnown RBP16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 STIM1Q13586 685 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 C1orf220Q5T0J3 134 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 TTI2Q6NXR4 508 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 RBM43Q6ZSC3 357 aaKnown RBP16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 WDR49Q8IV35 697 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 CSGALNACT2Q8N6G5 542 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 KHSRPQ92945 711 aaKnown RBP eCLIP16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 SUSD3Q96L08 255 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 NECTIN4Q96NY8 510 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 FNBP1Q96RU3 617 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 TSPY26PQ9H489 355 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 DOCK6Q96HP0 2047 aa16.92■□□□□ 0.3
CLK3P2-201ENST00000427566 TSC2P49815 1807 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 C19orf67A6NJJ6 358 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 H7C4K7 107 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 SYN3O14994 580 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 LILRA4P59901 499 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 SURF1Q15526 300 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 DPCR1Q3MIW9 517 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 LIN9Q5TKA1 542 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 RSPO2Q6UXX9 243 aaPredicted RBP16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 GPR149Q86SP6 731 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 ZC3H3Q8IXZ2 948 aaKnown RBP16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 APPL2Q8NEU8 664 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 CACTINQ8WUQ7 758 aaKnown RBP16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 ANKRD36BP1Q96IX9 119 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 TSG101Q99816 390 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 PLEKHA4Q9H4M7 779 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 AGAP1Q9UPQ3 857 aa16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 TIMM13Q9Y5L4 95 aaPredicted RBP16.91■□□□□ 0.3
CLK3P2-201ENST00000427566 CST3P01034 146 aaPredicted RBP16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 KRT19P08727 400 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 TRIM49P0CI25 452 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 TRIM49CP0CI26 452 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 AARSP49588 968 aaKnown RBP eCLIP16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 LRRC63Q05C16 580 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 PAK1Q13153 545 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 DUOXA2Q1HG44 320 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 CTXN3Q4LDR2 81 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 LILRA6Q6PI73 481 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 TRAPPC11Q7Z392 1133 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 FAM186BQ8IYM0 893 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 SMG7Q92540 1137 aaKnown RBP16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 ANP32BQ92688 251 aaKnown RBP16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 BORCS6Q96GS4 357 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 EPHX3Q9H6B9 360 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 PCDHB8Q9UN66 801 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 MYO10Q9HD67 2058 aa16.9■□□□□ 0.3
CLK3P2-201ENST00000427566 CETN3O15182 167 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 MAPK13O15264 365 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 NLRP12P59046 1061 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 CLDN10P78369 228 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 FKBP3Q00688 224 aaKnown RBP16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 RAB33AQ14088 237 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 PPM1LQ5SGD2 360 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 ZNF280DQ6N043 979 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 USP37Q86T82 979 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 RNF135Q8IUD6 432 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 HDAC7Q8WUI4 952 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 ELMO3Q96BJ8 720 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 FBXW11Q9UKB1 542 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 POLIQ9UNA4 740 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 NR2E1Q9Y466 385 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 BACE2Q9Y5Z0 518 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 NCOR1O75376 2440 aa16.89■□□□□ 0.29
CLK3P2-201ENST00000427566 LOC730098B7Z3J9 87 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 M0QZQ0 153 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 ZMYND10O75800 440 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 TNNC2P02585 160 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 C8AP07357 584 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 PPP1R2P41236 205 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 VAMP7P51809 220 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 YWHAHQ04917 246 aaPredicted RBP16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 TDRD10Q5VZ19 366 aaKnown RBP16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 C15orf39Q6ZRI6 1047 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 CCDC149Q6ZUS6 474 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 TMC2Q8TDI7 906 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 SENP8Q96LD8 212 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 MUTYHQ9UIF7 546 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 FBXL5Q9UKA1 691 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 ITGA11Q9UKX5 1188 aa16.88■□□□□ 0.29
CLK3P2-201ENST00000427566 CUL9Q8IWT3 2517 aa16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 C4BPAP04003 597 aaKnown RBP16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 CPB1P15086 417 aa16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 ELF1P32519 619 aa16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 TAF6P49848 677 aa16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 ROR1Q01973 937 aa16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 PPP3CAQ08209 521 aa16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 BFSP1Q12934 665 aa16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 TDRD5Q8NAT2 981 aaKnown RBP16.87■□□□□ 0.29
CLK3P2-201ENST00000427566 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms