RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ZNF197O14709 1029 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 KIAA0391O15091 583 aaKnown RBP19.9■□□□□ 0.78
GPC1-205ENST00000427506 EIF3DO15371 548 aaKnown RBP eCLIP19.9■□□□□ 0.78
GPC1-205ENST00000427506 CASP1P29466 404 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 WNT7BP56706 349 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 KRT85P78386 507 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 GPR17Q13304 367 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 MYBPC2Q14324 1141 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 SLC5A9Q2M3M2 681 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 ASTLQ6HA08 431 aaPredicted RBP19.9■□□□□ 0.78
GPC1-205ENST00000427506 THEM5Q8N1Q8 247 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 PRSS33Q8NF86 280 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 SPATA32Q96LK8 384 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 ZNF560Q96MR9 790 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 RPP25Q9BUL9 199 aaKnown RBP19.9■□□□□ 0.78
GPC1-205ENST00000427506 AVENQ9NQS1 362 aaPredicted RBP19.9■□□□□ 0.78
GPC1-205ENST00000427506 WNT16Q9UBV4 365 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 CA14Q9ULX7 337 aa19.9■□□□□ 0.78
GPC1-205ENST00000427506 KPNA7A9QM74 516 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 ITGB3P05106 788 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 CYP11A1P05108 521 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 POLR2BP30876 1174 aaKnown RBP19.89■□□□□ 0.77
GPC1-205ENST00000427506 PNPLA4P41247 253 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 PTPN5P54829 565 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 NHLH1Q02575 133 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 DUSP4Q13115 394 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 PLD1Q13393 1074 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 ZNF507Q8TCN5 953 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 GPR152Q8TDT2 470 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 TMEM209Q96SK2 561 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 PDE11AQ9HCR9 933 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 GDE1Q9NZC3 331 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 SERTAD1Q9UHV2 236 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 AGAP1Q9UPQ3 857 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 R3HCC1Q9Y3T6 440 aaKnown RBP19.89■□□□□ 0.77
GPC1-205ENST00000427506 YIPF1Q9Y548 306 aa19.89■□□□□ 0.77
GPC1-205ENST00000427506 ZNF233A6NK53 670 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 KRT19P08727 400 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 TMEM191BP0C7N4 346 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 MYL4P12829 197 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 CEBPBP17676 345 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 ALDH1A3P47895 512 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 CLCN5P51795 746 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 CUL4BQ13620 913 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 NELFCDQ8IXH7 590 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 HS6ST3Q8IZP7 471 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 CSGALNACT2Q8N6G5 542 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 TMEM105Q8N8V8 129 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 LEO1Q8WVC0 666 aaPredicted RBP19.88■□□□□ 0.77
GPC1-205ENST00000427506 TCEAL4Q96EI5 215 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 KXD1Q9BQD3 176 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 ASAH2Q9NR71 780 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 HSPBP1Q9NZL4 362 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 CEP72Q9P209 647 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 SLC27A5Q9Y2P5 690 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 ANK1P16157 1881 aa19.88■□□□□ 0.77
GPC1-205ENST00000427506 PVALEFA0A1B0GWK0 134 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 MTMR11A4FU01 709 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 VNN2O95498 520 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 HOXD13P35453 343 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 EPHB3P54753 998 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 BFSP1Q12934 665 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 SURF1Q15526 300 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 SLC39A12Q504Y0 691 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 PRSS36Q5K4E3 855 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 WSCD1Q658N2 575 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 CENPPQ6IPU0 288 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 EPM2AIP1Q7L775 607 aaPredicted RBP19.87■□□□□ 0.77
GPC1-205ENST00000427506 GRAMD1CQ8IYS0 662 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 C1orf127Q8N9H9 656 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 ATAD1Q8NBU5 361 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 OR10T2Q8NGX3 314 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 ANKRD36BP1Q96IX9 119 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 KIAA1586Q9HCI6 787 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 SLC39A2Q9NP94 309 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 ITGA11Q9UKX5 1188 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 ZDHHC9Q9Y397 364 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 ATP6V1DQ9Y5K8 247 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 DOCK8Q8NF50 2099 aa19.87■□□□□ 0.77
GPC1-205ENST00000427506 UBE4BO95155 1302 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 A0A1B0GVL5 298 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 KRBA1A5PL33 1030 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 SLFN14P0C7P3 912 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 NPR3P17342 541 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 NUBP1P53384 320 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 GPC5P78333 572 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 LMBRD2Q68DH5 695 aaPredicted RBP19.86■□□□□ 0.77
GPC1-205ENST00000427506 CWF19L1Q69YN2 538 aaKnown RBP19.86■□□□□ 0.77
GPC1-205ENST00000427506 HS2ST1Q7LGA3 356 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 CBWD2Q8IUF1 395 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 RDH13Q8NBN7 331 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 LEMD2Q8NC56 503 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 BORCS6Q96GS4 357 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 CHAMP1Q96JM3 812 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 MTMR12Q9C0I1 747 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 CRISPLD1Q9H336 500 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 SLC2A4RGQ9NR83 387 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 AGPAT3Q9NRZ7 376 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 DOCK6Q96HP0 2047 aa19.86■□□□□ 0.77
GPC1-205ENST00000427506 ZNF318Q5VUA4 2279 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms