RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
VNN3-208ENST00000427187 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
VNN3-208ENST00000427187 PHLPP2Q6ZVD8 1323 aa9.47□□□□□ -0.89
VNN3-208ENST00000427187 SFI1A8K8P3 1242 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 E9PMD0 336 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 DPYSL4O14531 572 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 SLC16A4O15374 487 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 HIP1RO75146 1068 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 RPP40O75818 363 aaKnown RBP9.46□□□□□ -0.9
VNN3-208ENST00000427187 EPN2O95208 641 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 KCNK5O95279 499 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 OR52Z1P0C646 297 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 ZNF806P0C7X5 589 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 CXCL8P10145 99 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 MCF2P10911 925 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 KCNE1P15382 129 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 SPINK2P20155 84 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 GABRR2P28476 465 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 MARCKSP29966 332 aaPredicted RBP9.46□□□□□ -0.9
VNN3-208ENST00000427187 RPL9P32969 192 aaKnown RBP9.46□□□□□ -0.9
VNN3-208ENST00000427187 YWHAHQ04917 246 aaPredicted RBP9.46□□□□□ -0.9
VNN3-208ENST00000427187 NBR1Q14596 966 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 SLC10A6Q3KNW5 377 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 GPR158Q5T848 1215 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 MPZL3Q6UWV2 235 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 RALGPS2Q86X27 583 aaPredicted RBP9.46□□□□□ -0.9
VNN3-208ENST00000427187 DAW1Q8N136 415 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 ATAD1Q8NBU5 361 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 LEMD2Q8NC56 503 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 APPL2Q8NEU8 664 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 GAB3Q8WWW8 586 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 MSANTD3Q96H12 275 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 LPIN3Q9BQK8 851 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 RUSC1Q9BVN2 902 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 MRPL4Q9BYD3 311 aaKnown RBP9.46□□□□□ -0.9
VNN3-208ENST00000427187 GPR88Q9GZN0 384 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 DDX19AQ9NUU7 478 aaKnown RBP9.46□□□□□ -0.9
VNN3-208ENST00000427187 ANK1P16157 1881 aa9.46□□□□□ -0.9
VNN3-208ENST00000427187 MTMR11A4FU01 709 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 PPEF2O14830 753 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 GIPC1O14908 333 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 DCLK1O15075 740 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 TOP3BO95985 862 aaKnown RBP9.45□□□□□ -0.9
VNN3-208ENST00000427187 PROZP22891 400 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 U2AF2P26368 475 aaKnown RBP eCLIP9.45□□□□□ -0.9
VNN3-208ENST00000427187 MPLP40238 635 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 RAP1GAPP47736 663 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 LIMK1P53667 647 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 EPHB3P54753 998 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 SHC2P98077 582 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 RAD51AP2Q09MP3 1159 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 DMP1Q13316 513 aaPredicted RBP9.45□□□□□ -0.9
VNN3-208ENST00000427187 TRIM29Q14134 588 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 ARHGAP29Q52LW3 1261 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 HAUS3Q68CZ6 603 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 NAIF1Q69YI7 327 aaPredicted RBP9.45□□□□□ -0.9
VNN3-208ENST00000427187 TRIM68Q6AZZ1 485 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 CACNA2D4Q7Z3S7 1137 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 DNAJB7Q7Z6W7 309 aaPredicted RBP9.45□□□□□ -0.9
VNN3-208ENST00000427187 BEST2Q8NFU1 509 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 GTF3C6Q969F1 213 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 E2F7Q96AV8 911 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 HHIPQ96QV1 700 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 KMT5AQ9NQR1 393 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 ARHGAP28Q9P2N2 729 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 ZMIZ1Q9ULJ6 1067 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 FASNP49327 2511 aaKnown RBP9.45□□□□□ -0.9
VNN3-208ENST00000427187 AKAP13Q12802 2813 aa9.45□□□□□ -0.9
VNN3-208ENST00000427187 OTOL1A6NHN0 477 aaPredicted RBP9.44□□□□□ -0.9
VNN3-208ENST00000427187 PP2D1A8MPX8 630 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 M0QZQ0 153 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 FOXD2O60548 495 aaPredicted RBP9.44□□□□□ -0.9
VNN3-208ENST00000427187 EGFP01133 1207 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 PROS1P07225 676 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 TNFSF9P41273 254 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 MATR3P43243 847 aaKnown RBP eCLIP9.44□□□□□ -0.9
VNN3-208ENST00000427187 ALDH1A3P47895 512 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 MLLT6P55198 1093 aaPredicted RBP9.44□□□□□ -0.9
VNN3-208ENST00000427187 ST3GAL1Q11201 340 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 FOXC1Q12948 553 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 MAPK7Q13164 816 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 PLD1Q13393 1074 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 NOLC1Q14978 699 aaKnown RBP eCLIP9.44□□□□□ -0.9
VNN3-208ENST00000427187 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 RNF43Q68DV7 783 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 CENPPQ6IPU0 288 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 FSTL4Q6MZW2 842 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 C1orf228Q6PIY5 440 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 UNQ6494/PRO21346Q6UXR6 183 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 DSTYKQ6XUX3 929 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 KCNK18Q7Z418 384 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 HAUS6Q7Z4H7 955 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 USP37Q86T82 979 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 STKLD1Q8NE28 680 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 BPIFB1Q8TDL5 484 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 CHFRQ96EP1 664 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 KIF12Q96FN5 646 aa9.44□□□□□ -0.9
VNN3-208ENST00000427187 SEPT5Q99719 369 aaPredicted RBP9.44□□□□□ -0.9
VNN3-208ENST00000427187 LSM14BQ9BX40 385 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms