RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 VRTNQ9H8Y1 702 aa23.14■■□□□ 1.29
RPUSD3-205ENST00000427174 THEGQ9P2T0 379 aa23.14■■□□□ 1.29
RPUSD3-205ENST00000427174 FBXL5Q9UKA1 691 aa23.14■■□□□ 1.29
RPUSD3-205ENST00000427174 BARX2Q9UMQ3 279 aaPredicted RBP23.14■■□□□ 1.29
RPUSD3-205ENST00000427174 CDY1Q9Y6F8 540 aa23.14■■□□□ 1.29
RPUSD3-205ENST00000427174 ARHGEF37A1IGU5 675 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 H7C4K7 107 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 PTMSP20962 102 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 ERCC5P28715 1186 aaPredicted RBP23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 GTF2H1P32780 548 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 OR1D2P34982 312 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 MARSP56192 900 aaKnown RBP23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 MYL6P60660 151 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 TFF2Q03403 129 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 YWHAHQ04917 246 aaPredicted RBP23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 MYO1EQ12965 1108 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 CT47A1Q5JQC4 288 aaPredicted RBP23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 OVOS1Q6IE37 1185 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 ZNF280DQ6N043 979 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 LLGL2Q6P1M3 1020 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 GLYCTKQ8IVS8 523 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 CASP10Q92851 521 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 SLC35C1Q96A29 364 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 RTP3Q9BQQ7 232 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 SRRTQ9BXP5 876 aaKnown RBP23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 ARMCX3Q9UH62 379 aaPredicted RBP23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 L1RE1Q9UN81 338 aa23.13■■□□□ 1.29
RPUSD3-205ENST00000427174 TCF20Q9UGU0 1960 aaKnown RBP23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 PTPRDP23468 1912 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 TGM5O43548 720 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 GLUD1P00367 558 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 KCNA5P22460 613 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 ATICP31939 592 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 GCLMP48507 274 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 BIRC3Q13489 604 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 NCOA4Q13772 614 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 LEXMQ3ZCV2 418 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 CTXN3Q4LDR2 81 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 WSCD1Q658N2 575 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 ANKRD54Q6NXT1 300 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 SYCE2Q6PIF2 218 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 DENND4AQ7Z401 1863 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 OXCT2Q9BYC2 517 aaPredicted RBP23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 METTL14Q9HCE5 456 aaKnown RBP23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 TMEM8AQ9HCN3 771 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 DACH1Q9UI36 760 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 DSEQ9UL01 958 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 SNX9Q9Y5X1 595 aa23.12■■□□□ 1.29
RPUSD3-205ENST00000427174 H3BQ06 376 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 ABLIM3O94929 683 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 PAPLNO95428 1278 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 ROR1Q01973 937 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 SOWAHAQ2M3V2 549 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 CAVIN1Q6NZI2 390 aaKnown RBP23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 DPH6Q7L8W6 267 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 PALB2Q86YC2 1186 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 IRF2BP1Q8IU81 584 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 PDCL2Q8N4E4 241 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 TOP6BLQ8N6T0 577 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 SPATA18Q8TC71 538 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 HDAC7Q8WUI4 952 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 FBXW11Q9UKB1 542 aa23.11■■□□□ 1.29
RPUSD3-205ENST00000427174 WDR27A2RRH5 827 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 PHACTR2O75167 634 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 GNA14O95837 355 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 HLA-DRAP01903 254 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 TRPC3Q13507 836 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 TRIM59Q8IWR1 403 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 TMEM86AQ8N2M4 240 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 SMRP1Q8NCR6 262 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 TAS1R2Q8TE23 839 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 SYAP1Q96A49 352 aaPredicted RBP23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 S1PR5Q9H228 398 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 DZANK1Q9NVP4 752 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 R3HCC1Q9Y3T6 440 aaKnown RBP23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 VCANP13611 3396 aa23.1■■□□□ 1.29
RPUSD3-205ENST00000427174 OR6C75A6NL08 312 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 GABRDO14764 452 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 HUS1O60921 280 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 ASS1P00966 412 aaKnown RBP23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 SRGAP2BP0DMP2 458 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 HOXB8P17481 243 aaPredicted RBP23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 KRT39Q6A163 491 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 EP400NLQ6ZTU2 488 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 OR10T2Q8NGX3 314 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 ZNF461Q8TAF7 563 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 KBTBD7Q8WVZ9 684 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 ATXN2LQ8WWM7 1075 aaKnown RBP23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 PLEKHA4Q9H4M7 779 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 MAN1C1Q9NR34 630 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 COQ4Q9Y3A0 265 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 NOTCH4Q99466 2003 aa23.09■■□□□ 1.29
RPUSD3-205ENST00000427174 STX10O60499 249 aa23.08■■□□□ 1.29
RPUSD3-205ENST00000427174 FGFR1OPO95684 399 aaKnown RBP23.08■■□□□ 1.29
RPUSD3-205ENST00000427174 SPATA31D3P0C874 917 aa23.08■■□□□ 1.29
RPUSD3-205ENST00000427174 MXI1P50539 228 aa23.08■■□□□ 1.29
RPUSD3-205ENST00000427174 SGSM1Q2NKQ1 1148 aa23.08■■□□□ 1.29
RPUSD3-205ENST00000427174 WDR72Q3MJ13 1102 aa23.08■■□□□ 1.29
RPUSD3-205ENST00000427174 CCDC40Q4G0X9 1142 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms