RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 PDZD4Q76G19 769 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 STRA8Q7Z7C7 330 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 FMNL3Q8IVF7 1028 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 CLRN3Q8NCR9 226 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 EAF2Q96CJ1 260 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 KCTD10Q9H3F6 313 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 LAS1LQ9Y4W2 734 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 PNPLA7Q6ZV29 1317 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 NOTCH3Q9UM47 2321 aa3.18□□□□□ -1.9
R3HDM1-205ENST00000425804 CXorf49A8MYA2 514 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 KCNU1A8MYU2 1149 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 ADM5C9JUS6 153 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 NEMP1O14524 444 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 ALPLP05186 524 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 LTA4HP09960 611 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 BPIP17213 487 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 GCSHP23434 173 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 CTSSP25774 331 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 GPR15P49685 360 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 NRG3P56975 720 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 RHBDL3P58872 404 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 RAP2BP61225 183 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 CCT2P78371 535 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 OCRLQ01968 901 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 ODR4Q5SWX8 454 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 CCSAPQ6IQ19 270 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 IRF2BP2Q7Z5L9 587 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 RASSF3Q86WH2 238 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 GLB1L2Q8IW92 636 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 AHI1Q8N157 1196 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 REPS2Q8NFH8 660 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 OR14C36Q8NHC7 312 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 SNX33Q8WV41 574 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 RPS6KC1Q96S38 1066 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 PRSS22Q9GZN4 317 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 VTA1Q9NP79 307 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 GPRC5DQ9NZD1 345 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 ICKQ9UPZ9 632 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 PLAAQ9Y263 795 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 NOC2LQ9Y3T9 749 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 CDY2AQ9Y6F7 541 aa3.17□□□□□ -1.9
R3HDM1-205ENST00000425804 CCDC88BA6NC98 1476 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 A0A0U1RQG5 324 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 FAM90A10PA6NDY2 464 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 GTPBP1O00178 669 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 SOCS2O14508 198 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 PROM1O43490 865 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 NRP2O60462 931 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 SNRPA1P09661 255 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 GYS2P54840 703 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 CDK17Q00537 523 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 STRN3Q13033 797 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 OS9Q13438 667 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 FAM50AQ14320 339 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 SEMA3AQ14563 771 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 CCDC178Q5BJE1 867 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 RNF180Q86T96 592 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 C11orf74Q86VG3 221 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 PNISRQ8TF01 805 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 TGFBRAP1Q8WUH2 860 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 STAG1Q8WVM7 1258 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 LYZL4Q96KX0 146 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 C8orf48Q96LL4 319 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 TRMOQ9BU70 441 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 DPP7Q9UHL4 492 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 TCEAL9Q9UHQ7 104 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 COMMD10Q9Y6G5 202 aa3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 TCF20Q9UGU0 1960 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-205ENST00000425804 TARM1B6A8C7 271 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 GCOM1H8Y6P7 765 aaPredicted RBP3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 PLIN1O60240 522 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 PRSS23O95084 383 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 TUBB4AP04350 444 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 SRGNP10124 158 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 SCP2P22307 547 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 PAX3P23760 479 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 ADSLP30566 484 aaPredicted RBP3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 AMPD3Q01432 767 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 UGT8Q16880 541 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 PROSER3Q2NL68 480 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 KRT71Q3SY84 523 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 C19orf54Q5BKX5 351 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 Q6ZVL8 140 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 NRACQ8N912 160 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 TSPEARQ8WU66 669 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 USP7Q93009 1102 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 CAMKK2Q96RR4 588 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 MAF1Q9H063 256 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 DMRT3Q9NQL9 472 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 KCNG1Q9UIX4 513 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 PCDHB1Q9Y5F3 818 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 LAMC3Q9Y6N6 1575 aa3.15□□□□□ -1.91
R3HDM1-205ENST00000425804 WDR62O43379 1518 aa3.14□□□□□ -1.91
R3HDM1-205ENST00000425804 KIF3BO15066 747 aa3.14□□□□□ -1.91
R3HDM1-205ENST00000425804 GASTP01350 101 aa3.14□□□□□ -1.91
R3HDM1-205ENST00000425804 HTR6P50406 440 aa3.14□□□□□ -1.91
R3HDM1-205ENST00000425804 HILS1P60008 231 aa3.14□□□□□ -1.91
R3HDM1-205ENST00000425804 HDAC1Q13547 482 aaPredicted RBP3.14□□□□□ -1.91
R3HDM1-205ENST00000425804 UBE4AQ14139 1066 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms