RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 STK33Q9BYT3 514 aa10.13□□□□□ -0.79
LINC01006-203ENST00000425712 UBE2TQ9NPD8 197 aaPredicted RBP10.13□□□□□ -0.79
LINC01006-203ENST00000425712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.13□□□□□ -0.791e-7■■■■■ 115.4
LINC01006-203ENST00000425712 SPG21Q9NZD8 308 aa10.13□□□□□ -0.79
LINC01006-203ENST00000425712 HCSTQ9UBK5 93 aa10.13□□□□□ -0.79
LINC01006-203ENST00000425712 CACNG4Q9UBN1 327 aa10.13□□□□□ -0.79
LINC01006-203ENST00000425712 MSRAQ9UJ68 235 aa10.13□□□□□ -0.79
LINC01006-203ENST00000425712 PCDHB8Q9UN66 801 aa10.13□□□□□ -0.79
LINC01006-203ENST00000425712 LUC7L2Q9Y383 392 aaKnown RBP10.13□□□□□ -0.79
LINC01006-203ENST00000425712 SCN1AP35498 2009 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 LCHNA4D1U4 455 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 LINC01553A4QN01 128 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 F8VZ95 297 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 EPHB6O15197 1021 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 MFAP3LO75121 409 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 LRRN2O75325 713 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 CYP11A1P05108 521 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 ITGB1P05556 798 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 CCDC172P0C7W6 258 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 WARSP23381 471 aaKnown RBP10.12□□□□□ -0.79
LINC01006-203ENST00000425712 CTNNB1P35222 781 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 STAT1P42224 750 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 BRCC3P46736 316 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 GSDMDP57764 484 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 ZBED6P86452 979 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 INCA1Q0VD86 236 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 CCDC173Q0VFZ6 552 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 PTPN21Q16825 1174 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 ARHGAP44Q17R89 818 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 TIGD5Q53EQ6 642 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 DPY19L2P1Q6NXN4 242 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 PDXDC1Q6P996 788 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 CHRDL2Q6WN34 429 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 RRAGAQ7L523 313 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 LIMS2Q7Z4I7 341 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 HASPINQ8TF76 798 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 SHC3Q92529 594 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 TATDN2Q93075 761 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 KREMEN1Q96MU8 473 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 HERC2P3Q9BVR0 1158 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 SMYD3Q9H7B4 428 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 NLRC4Q9NPP4 1024 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 CISHQ9NSE2 258 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 CAPN11Q9UMQ6 739 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 L1RE1Q9UN81 338 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 POLIQ9UNA4 740 aa10.12□□□□□ -0.79
LINC01006-203ENST00000425712 NLRC5Q86WI3 1866 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 GBF1Q92538 1859 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 NT5C1B-RDH14C9J2C7 533 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 AKR1B15C9JRZ8 316 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 C5orf67F2Z3F1 127 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 SOD2P04179 222 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 RB1P06400 928 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 CA3P07451 260 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 CD58P19256 250 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 CASP14P31944 242 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 BMPR1AP36894 532 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 PBX3P40426 434 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 LHX1P48742 406 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 RABGGTBP53611 331 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 JAM2P57087 298 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 SMAD3P84022 425 aaKnown RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 PLCB3Q01970 1234 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 APBA1Q02410 837 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 KRT17Q04695 432 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 YWHAHQ04917 246 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 UBE3AQ05086 875 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 TBX2Q13207 712 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 DRAP1Q14919 205 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 SOWAHAQ2M3V2 549 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 TSR1Q2NL82 804 aaKnown RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 USP41Q3LFD5 358 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 SCARA3Q6AZY7 606 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 FAM109BQ6ICB4 259 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 ZNF280DQ6N043 979 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 GJB7Q6PEY0 223 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 CD300LGQ6UXG3 332 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 UNC93AQ86WB7 457 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 TMEM173Q86WV6 379 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 RNF168Q8IYW5 571 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 PDCL2Q8N4E4 241 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 UBR7Q8N806 425 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 BAP1Q92560 729 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 RABGGTAQ92696 567 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 KAT5Q92993 513 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 PDLIM2Q96JY6 352 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 TGS1Q96RS0 853 aaKnown RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 ARID3AQ99856 593 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 C11orf84Q9BUA3 381 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 OXCT2Q9BYC2 517 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 PBX4Q9BYU1 374 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 PRO3102Q9H379 93 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 SNX25Q9H3E2 840 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 BARX2Q9UMQ3 279 aaPredicted RBP10.11□□□□□ -0.79
LINC01006-203ENST00000425712 LZTS1Q9Y250 596 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 PCDHB4Q9Y5E5 795 aa10.11□□□□□ -0.79
LINC01006-203ENST00000425712 LRRC53A6NM62 1247 aa10.1□□□□□ -0.79
LINC01006-203ENST00000425712 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
LINC01006-203ENST00000425712 F8W810 466 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms