RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 HDAC7Q8WUI4 952 aa13.83□□□□□ -0.2
SGCE-203ENST00000425444 KCNN1Q92952 543 aa13.83□□□□□ -0.2
SGCE-203ENST00000425444 C18orf25Q96B23 403 aaPredicted RBP13.83□□□□□ -0.2
SGCE-203ENST00000425444 KIF12Q96FN5 646 aa13.83□□□□□ -0.2
SGCE-203ENST00000425444 MSTO1Q9BUK6 570 aa13.83□□□□□ -0.2
SGCE-203ENST00000425444 HAPLN2Q9GZV7 340 aa13.83□□□□□ -0.2
SGCE-203ENST00000425444 MRPL44Q9H9J2 332 aaKnown RBP13.83□□□□□ -0.2
SGCE-203ENST00000425444 ZDHHC7Q9NXF8 308 aa13.83□□□□□ -0.2
SGCE-203ENST00000425444 CDH7Q9ULB5 785 aa13.83□□□□□ -0.2
SGCE-203ENST00000425444 C1QTNF9BB2RNN3 333 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 OGTO15294 1046 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 C1QTNF9P0C862 333 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 GAP43P17677 238 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 FGFR3P22607 806 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 TKTP29401 623 aaKnown RBP13.82□□□□□ -0.2
SGCE-203ENST00000425444 RPL9P32969 192 aaKnown RBP13.82□□□□□ -0.2
SGCE-203ENST00000425444 TNFSF9P41273 254 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 GTF2BQ00403 316 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 SPAG1Q07617 926 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 PPP2R5DQ14738 602 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 LIN9Q5TKA1 542 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 ZNF852Q6ZMS4 543 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 FIZ1Q96SL8 496 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 CLSTN3Q9BQT9 956 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 RPF1Q9H9Y2 349 aaKnown RBP13.82□□□□□ -0.2
SGCE-203ENST00000425444 PLEKHA5Q9HAU0 1116 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 SEL1LQ9UBV2 794 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 TUBGCP4Q9UGJ1 667 aa13.82□□□□□ -0.2
SGCE-203ENST00000425444 MRPS17Q9Y2R5 130 aaKnown RBP13.82□□□□□ -0.2
SGCE-203ENST00000425444 NAV2Q8IVL1 2488 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 FREM2Q5SZK8 3169 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 A0A087X0B3 334 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 MEFVO15553 781 aaPredicted RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 XPOTO43592 962 aaKnown RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 FOXD2O60548 495 aaPredicted RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 CUTAO60888 179 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 GCNT3O95395 438 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 PAPLNO95428 1278 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 C1RP00736 705 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 TDGF1P13385 188 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 IGFBP6P24592 240 aaPredicted RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 MCM4P33991 863 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 ADCY1Q08828 1119 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 SIM2Q14190 667 aaPredicted RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 AASDHQ4L235 1098 aaPredicted RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 ADALQ6DHV7 355 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 UNQ6494/PRO21346Q6UXR6 183 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 GRASPQ7Z6J2 395 aaPredicted RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 HVCN1Q96D96 273 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 KXD1Q9BQD3 176 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 ST6GALNAC4Q9H4F1 302 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 TBC1D7Q9P0N9 293 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 FBXW11Q9UKB1 542 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 UBQLN1Q9UMX0 589 aaKnown RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 EXOC7Q9UPT5 735 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.81□□□□□ -0.2
SGCE-203ENST00000425444 CDY1Q9Y6F8 540 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 CITO14578 2027 aa13.81□□□□□ -0.2
SGCE-203ENST00000425444 A0A0B4J269 797 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 TTC26A0AVF1 554 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 ANKRD63C9JTQ0 380 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 C8AP07357 584 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 OR1D2P34982 312 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 NTHL1P78549 312 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 PKP1Q13835 747 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 ENOX2Q16206 610 aaKnown RBP13.8□□□□□ -0.2
SGCE-203ENST00000425444 SLC39A4Q6P5W5 647 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 LILRA6Q6PI73 481 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 CD300LGQ6UXG3 332 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 ZNF720Q7Z2F6 126 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 FGF13Q92913 245 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 DHX58Q96C10 678 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 DNAJC19Q96DA6 116 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 LRRC27Q9C0I9 530 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 CUEDC2Q9H467 287 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 PANK4Q9NVE7 773 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 MTRRQ9UBK8 725 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 TRIP11Q15643 1979 aa13.8□□□□□ -0.2
SGCE-203ENST00000425444 LACTBL1A8MY62 500 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 TISP43B9A030 160 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
SGCE-203ENST00000425444 SYN3O14994 580 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 ADAM12O43184 909 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 FAM189A1O60320 539 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 ZMYND10O75800 440 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 ME1P48163 572 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 FZD5Q13467 585 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 PPM1LQ5SGD2 360 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 L1TD1Q5T7N2 865 aaKnown RBP13.79□□□□□ -0.2
SGCE-203ENST00000425444 ATL3Q6DD88 541 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 SLFN12LQ6IEE8 588 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 CCDC65Q8IXS2 484 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 SYCP3Q8IZU3 236 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 BEST2Q8NFU1 509 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 SLC7A14Q8TBB6 771 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 POMGNT1Q8WZA1 660 aa13.79□□□□□ -0.2
SGCE-203ENST00000425444 ACCSQ96QU6 501 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms