RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 PARP2Q9UGN5 583 aa13.77□□□□□ -0.2
COL12A1-205ENST00000425443 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.77□□□□□ -0.2
COL12A1-205ENST00000425443 TCP11X1B4DZS4 312 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 UBOX5O94941 541 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 HLA-DRAP01903 254 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 CNTN2Q02246 1040 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 GCNT1Q02742 428 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 KYNUQ16719 465 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 KAZNQ674X7 775 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 RHBDF2Q6PJF5 856 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 ANKS1BQ7Z6G8 1248 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 TAB3Q8N5C8 712 aaPredicted RBP13.77□□□□□ -0.21
COL12A1-205ENST00000425443 REPS2Q8NFH8 660 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 FAM81BQ96LP2 452 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 TMEM109Q9BVC6 243 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 PCDHB4Q9Y5E5 795 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 PCDHB2Q9Y5E7 798 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 NFASCO94856 1347 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 PASKQ96RG2 1323 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 TMEM120BA0PK00 339 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 A8MUI8 341 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 SPATA31C2B4DYI2 1134 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 SNX3O60493 162 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 STAM2O75886 525 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 CFHP08603 1231 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 CA8P35219 290 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 NLRP11P59045 1033 aaKnown RBP13.77□□□□□ -0.21
COL12A1-205ENST00000425443 MTM1Q13496 603 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 CLEC16AQ2KHT3 1053 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 CGB2Q6NT52 195 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 EEPD1Q7L9B9 569 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 ZBTB45Q96K62 511 aaPredicted RBP13.77□□□□□ -0.21
COL12A1-205ENST00000425443 C11orf70Q9BRQ4 267 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 TARS2Q9BW92 718 aaKnown RBP13.77□□□□□ -0.21
COL12A1-205ENST00000425443 NOD2Q9HC29 1040 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 ARHGAP28Q9P2N2 729 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 PNMA3Q9UL41 463 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 TRIM33Q9UPN9 1127 aa13.77□□□□□ -0.21
COL12A1-205ENST00000425443 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-205ENST00000425443 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 GSTTP1A0A1W2PQM5 241 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 ADCY8P40145 1251 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 MAGEA8P43361 318 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 SP2Q02086 613 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 ITIH4Q14624 930 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 TMEM270Q6UE05 265 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-205ENST00000425443 ARPC5LQ9BPX5 153 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 L3MBTL1Q9Y468 752 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 KIAA1217Q5T5P2 1943 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 PEX10O60683 326 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 ZC3H11AO75152 810 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL12A1-205ENST00000425443 CLTAP09496 248 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 CD58P19256 250 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 RTP1P59025 263 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 LIN9Q5TKA1 542 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 SLFN12LQ6IEE8 588 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 NCAPG2Q86XI2 1143 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 DRAXINQ8NBI3 349 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-205ENST00000425443 ZNF516Q92618 1163 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 PRCCQ92733 491 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-205ENST00000425443 ARHGEF2Q92974 986 aaKnown RBP13.76□□□□□ -0.21
COL12A1-205ENST00000425443 ACSF2Q96CM8 615 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-205ENST00000425443 IMPG2Q9BZV3 1241 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 LRRC19Q9H756 370 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 RGS17Q9UGC6 210 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-205ENST00000425443 BAIAP2L1Q9UHR4 511 aa13.76□□□□□ -0.21
COL12A1-205ENST00000425443 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
COL12A1-205ENST00000425443 PI4K2BG5E9Z4 385 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 STBD1O95210 358 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 GBP1P32455 592 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 FAM182AQ5T1J6 154 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 MFSD5Q6N075 450 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 CYP4F22Q6NT55 531 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 TAS1R3Q7RTX0 852 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 KIF2BQ8N4N8 673 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 C12orf50Q8NA57 414 aaPredicted RBP13.75□□□□□ -0.21
COL12A1-205ENST00000425443 HAUS1Q96CS2 278 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 KLRG1Q96E93 195 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 SAMD15Q9P1V8 674 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 FBXO40Q9UH90 709 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 ZNF112Q9UJU3 913 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 MROH7Q68CQ1 1323 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 MYH9P35579 1960 aaKnown RBP13.75□□□□□ -0.21
COL12A1-205ENST00000425443 ITGA8P53708 1063 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 NCALDP61601 193 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 MGAT5Q09328 741 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 SLMAPQ14BN4 828 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 PDCD2Q16342 344 aaPredicted RBP13.75□□□□□ -0.21
COL12A1-205ENST00000425443 ZNF394Q53GI3 561 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 GSTA5Q7RTV2 222 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
COL12A1-205ENST00000425443 ANKLE1Q8NAG6 615 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 ASAP3Q8TDY4 903 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 C9orf72Q96LT7 481 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 RUNDC3BQ96NL0 473 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 NRBP2Q9NSY0 501 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 FSCN2O14926 492 aa13.75□□□□□ -0.21
COL12A1-205ENST00000425443 MAGEA10P43363 369 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms