RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 NFICP08651 508 aa12.27□□□□□ -0.44
UBR4-207ENST00000425413 MYBL1P10243 752 aa12.27□□□□□ -0.44
UBR4-207ENST00000425413 INSRRP14616 1297 aa12.27□□□□□ -0.44
UBR4-207ENST00000425413 YBX3P16989 372 aaKnown RBP eCLIP12.27□□□□□ -0.442e-11■□□□□ 10.1
UBR4-207ENST00000425413 PPP2R2AP63151 447 aa12.27□□□□□ -0.44
UBR4-207ENST00000425413 HP1BP3Q5SSJ5 553 aaPredicted RBP12.27□□□□□ -0.44
UBR4-207ENST00000425413 TCP11Q8WWU5 503 aa12.27□□□□□ -0.44
UBR4-207ENST00000425413 FAM81BQ96LP2 452 aa12.27□□□□□ -0.44
UBR4-207ENST00000425413 OSBPL8Q9BZF1 889 aa12.27□□□□□ -0.44
UBR4-207ENST00000425413 MRPL47Q9HD33 250 aaKnown RBP12.27□□□□□ -0.44
UBR4-207ENST00000425413 CPSF3Q9UKF6 684 aaKnown RBP12.27□□□□□ -0.44
UBR4-207ENST00000425413 IVNS1ABPQ9Y6Y0 642 aa12.27□□□□□ -0.44
UBR4-207ENST00000425413 A0A087WZ62 844 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 CXCL11O14625 94 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 HOXC6P09630 235 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 CDR1P51861 262 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 LACTBP83111 547 aaPredicted RBP12.27□□□□□ -0.45
UBR4-207ENST00000425413 OGDHQ02218 1023 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 CYP1B1Q16678 543 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 SMTNL2Q2TAL5 461 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 DNAJC24Q6P3W2 148 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 MPZL3Q6UWV2 235 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 RHOT1Q8IXI2 618 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 MICALL1Q8N3F8 863 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 FEZF2Q8TBJ5 459 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 MPHOSPH6Q99547 160 aaKnown RBP12.27□□□□□ -0.45
UBR4-207ENST00000425413 FDXACB1Q9BRP7 624 aaPredicted RBP12.27□□□□□ -0.45
UBR4-207ENST00000425413 DCLK3Q9C098 648 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 CDT1Q9H211 546 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 LRRC19Q9H756 370 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 GPR25O00155 361 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 ABLIM1O14639 778 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 TNNC2P02585 160 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 KRT1P04264 644 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 OSBPP22059 807 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 FNTAP49354 379 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 LIG3P49916 1009 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 ITGA8P53708 1063 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 CORO7P57737 925 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 DYNLT1P63172 113 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 ADCY1Q08828 1119 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 PTP4A2Q12974 167 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 LONRF1Q17RB8 773 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 DENND1BQ6P3S1 775 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 CCDC62Q6P9F0 684 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 ARMCX2Q7L311 632 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 NLRP14Q86W24 1093 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 CCT8L2Q96SF2 557 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 EPN3Q9H201 632 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 C10orf88Q9H8K7 445 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 PARVAQ9NVD7 372 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 HMGXB4Q9UGU5 601 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 FAM169AQ9Y6X4 670 aa12.27□□□□□ -0.45
UBR4-207ENST00000425413 RGS16O15492 202 aaPredicted RBP12.26□□□□□ -0.45
UBR4-207ENST00000425413 ZSCAN5DPP0CG00 497 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 MMP8P22894 467 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 DRG2P55039 364 aaKnown RBP12.26□□□□□ -0.45
UBR4-207ENST00000425413 MCL1Q07820 350 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 TMEM62Q0P6H9 643 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 MOGSQ13724 837 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 TTLL4Q14679 1199 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 SGSM1Q2NKQ1 1148 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 PLEKHA7Q6IQ23 1121 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 EMC1Q8N766 993 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 AFG1LQ8WV93 481 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 SMARCAD1Q9H4L7 1026 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ZWILCHQ9H900 591 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 SAE1Q9UBE0 346 aaPredicted RBP12.26□□□□□ -0.45
UBR4-207ENST00000425413 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 CEP350Q5VT06 3117 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ACKR2O00590 384 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ITGB3P05106 788 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ETS1P14921 441 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ATF2P15336 505 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 EPHX2P34913 555 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ADCYAP1R1P41586 468 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 SLC1A1P43005 524 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 MAGEA9P43362 315 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ZNF252P-AS1Q0IIN9 211 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 MTM1Q13496 603 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 KYNUQ16719 465 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 CDCA2Q69YH5 1023 aaPredicted RBP12.26□□□□□ -0.45
UBR4-207ENST00000425413 MFSD7Q6UXD7 560 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 TRIM72Q6ZMU5 477 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 CAPN12Q6ZSI9 719 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ZNF365Q70YC5 407 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ERICH1Q86X53 443 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 PHF13Q86YI8 300 aaPredicted RBP12.26□□□□□ -0.45
UBR4-207ENST00000425413 ARFGAP2Q8N6H7 521 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 GLIS1Q8NBF1 620 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ZNF473Q8WTR7 871 aaKnown RBP12.26□□□□□ -0.45
UBR4-207ENST00000425413 ART4Q93070 314 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 ANKRD36BP1Q96IX9 119 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 RPF1Q9H9Y2 349 aaKnown RBP12.26□□□□□ -0.45
UBR4-207ENST00000425413 SLC12A6Q9UHW9 1150 aa12.26□□□□□ -0.45
UBR4-207ENST00000425413 DNAJC25-GNG10A0A024R161 153 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 LRRD1A4D1F6 860 aa12.25□□□□□ -0.45
UBR4-207ENST00000425413 RIPK2O43353 540 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms