RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PRR23CQ6ZRP0 262 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SHKBP1Q8TBC3 707 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 C2orf15Q8WU43 125 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CALML4Q96GE6 196 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 LOXL4Q96JB6 756 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ZBTB45Q96K62 511 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 R3HCC1Q9Y3T6 440 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TIMM13Q9Y5L4 95 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 USP34Q70CQ2 3546 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MYBPHLA2RUH7 354 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SLC38A8A6NNN8 435 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PAPSS2O95340 614 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CCDC192P0DO97 292 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 IGFBP6P24592 240 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 U2AF2P26368 475 aaKnown RBP eCLIP13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 HOXA6P31267 233 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 AVPR1AP37288 418 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SATB1Q01826 763 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 DMWDQ09019 674 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 BFSP1Q12934 665 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ST3GAL2Q16842 350 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ITPRIPL2Q3MIP1 535 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MGAT5BQ3V5L5 792 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SLFN12LQ6IEE8 588 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CENPPQ6IPU0 288 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CACNA2D4Q7Z3S7 1137 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 DCP1BQ8IZD4 617 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 C4orf32Q8N8J7 132 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PSMG2Q969U7 264 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TASP1Q9H6P5 420 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SLC27A5Q9Y2P5 690 aa13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CCDC163A0A0D9SF12 145 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TTC26A0AVF1 554 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 H3BQV1 296 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 HNRNPDLO14979 420 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 OGTO15294 1046 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SLC26A4O43511 780 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 HRO43593 1189 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 FAM13AO94988 1023 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CXCL8P10145 99 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MAPTP10636 758 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 WEE1P30291 646 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CTHP32929 405 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 RAD51AP2Q09MP3 1159 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SEZ6Q53EL9 994 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 WDR5BQ86VZ2 330 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MYCT1Q8N699 235 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TMEM161BQ8NDZ6 487 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TMEM209Q96SK2 561 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SEPT5Q99719 369 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PCDHB6Q9Y5E3 794 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CFAP54Q96N23 3096 aa13.3□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SOBPA7XYQ1 873 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 LACTBL1A8MY62 500 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 AXIN1O15169 862 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MOSPD3O75425 235 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PLA2G4BP0C869 781 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 DDX6P26196 483 aaKnown RBP eCLIP13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 UBA7P41226 1012 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MCM2P49736 904 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SPAG1Q07617 926 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 NR1H3Q13133 447 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PON2Q15165 354 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ARL6IP4Q66PJ3 421 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TAS1R3Q7RTX0 852 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 DAW1Q8N136 415 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CAMKK1Q8N5S9 505 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SPPL2BQ8TCT7 592 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SENP8Q96LD8 212 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MSTO1Q9BUK6 570 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ZHX3Q9H4I2 956 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ASB7Q9H672 318 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PARD6AQ9NPB6 346 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TUBGCP4Q9UGJ1 667 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 DERAQ9Y315 318 aa13.29□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MTMR11A4FU01 709 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 RPP40O75818 363 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 RHOBTB1O94844 696 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 OR4Q2P0C623 313 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TDGF1P13385 188 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TGM1P22735 817 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CDC25AP30304 524 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 LILRA4P59901 499 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 POSTNQ15063 836 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ZBTB6Q15916 424 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 FBXO43Q4G163 708 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SPATA1Q5VX52 437 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ZNF687Q8N1G0 1237 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ATAD1Q8NBU5 361 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TTC8Q8TAM2 541 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MRPS31Q92665 395 aaKnown RBP13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 AK8Q96MA6 479 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 KIF9Q9HAQ2 790 aa13.28□□□□□ -0.28
HLA-DQB3-203ENST00000425319 GKN1Q9NS71 199 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms