RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 E2F4Q16254 413 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 SLC5A9Q2M3M2 681 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 CWF19L1Q69YN2 538 aaKnown RBP17.91■□□□□ 0.46
SHANK2-207ENST00000425049 SHC4Q6S5L8 630 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 CRELD2Q6UXH1 353 aaPredicted RBP17.91■□□□□ 0.46
SHANK2-207ENST00000425049 THEM5Q8N1Q8 247 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 MCRS1Q96EZ8 462 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 KXD1Q9BQD3 176 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 TRIM9Q9C026 710 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 SLC2A4RGQ9NR83 387 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 R3HCC1Q9Y3T6 440 aaKnown RBP17.91■□□□□ 0.46
SHANK2-207ENST00000425049 YIPF1Q9Y548 306 aa17.91■□□□□ 0.46
SHANK2-207ENST00000425049 CYB561D2O14569 222 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 KIAA0391O15091 583 aaKnown RBP17.9■□□□□ 0.46
SHANK2-207ENST00000425049 SPTLC1O15269 473 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 POLR2DO15514 142 aaKnown RBP17.9■□□□□ 0.46
SHANK2-207ENST00000425049 EXTL3O43909 919 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 CEBPBP17676 345 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 ALDH1A3P47895 512 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 EPHB3P54753 998 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 TCF15Q12870 199 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 GPR17Q13304 367 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 ALYREFQ86V81 257 aaKnown RBP17.9■□□□□ 0.46
SHANK2-207ENST00000425049 EFCAB13Q8IY85 973 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 ATOH1Q92858 354 aaPredicted RBP17.9■□□□□ 0.46
SHANK2-207ENST00000425049 CBWD1Q9BRT8 395 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 FGFBP2Q9BYJ0 223 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 TBC1D17Q9HA65 648 aa17.9■□□□□ 0.46
SHANK2-207ENST00000425049 GOLGA8IPA6NC78 632 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 GOLGA8JA6NMD2 632 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 EIF3DO15371 548 aaKnown RBP eCLIP17.89■□□□□ 0.458e-9■■□□□ 12.4
SHANK2-207ENST00000425049 CYP11A1P05108 521 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 MYL4P12829 197 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 MRE11P49959 708 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 PFKPQ01813 784 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 FAM26FQ5R3K3 315 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 CEP57L1Q8IYX8 460 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 GPD1LQ8N335 351 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 SHDQ96IW2 340 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 RPP25Q9BUL9 199 aaKnown RBP17.89■□□□□ 0.45
SHANK2-207ENST00000425049 PCIF1Q9H4Z3 704 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 PCDHA7Q9UN72 937 aa17.89■□□□□ 0.45
SHANK2-207ENST00000425049 DOCK6Q96HP0 2047 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 KRBA1A5PL33 1030 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 ECI2O75521 394 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 MICAL2O94851 1124 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 TMEM191BP0C7N4 346 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 NPR3P17342 541 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 POLR2BP30876 1174 aaKnown RBP17.88■□□□□ 0.45
SHANK2-207ENST00000425049 GPC5P78333 572 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 DNM1Q05193 864 aaKnown RBP17.88■□□□□ 0.45
SHANK2-207ENST00000425049 DUSP4Q13115 394 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 PKP1Q13835 747 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 PRSS36Q5K4E3 855 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 HPS3Q969F9 1004 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 SLITRK6Q9H5Y7 841 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 CEP72Q9P209 647 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 UBE4BO95155 1302 aa17.88■□□□□ 0.45
SHANK2-207ENST00000425049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.87■□□□□ 0.45
SHANK2-207ENST00000425049 MTMR11A4FU01 709 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 KPNA7A9QM74 516 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 H0Y858 1186 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 ITGB3P05106 788 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 KRT19P08727 400 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 VEPH1Q14D04 833 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 SURF1Q15526 300 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 SLC39A12Q504Y0 691 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 RESP18Q5W5W9 173 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 CENPPQ6IPU0 288 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 CNNM4Q6P4Q7 775 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 HS2ST1Q7LGA3 356 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 HS6ST3Q8IZP7 471 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 ATAD1Q8NBU5 361 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 OR10T2Q8NGX3 314 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 FAM200AQ8TCP9 573 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 TCEAL4Q96EI5 215 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 ANKRD36BP1Q96IX9 119 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 SEPT5Q99719 369 aaPredicted RBP17.87■□□□□ 0.45
SHANK2-207ENST00000425049 C7orf25Q9BPX7 421 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 ZFP14Q9HCL3 533 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 FAM86C1Q9NVL1 165 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 ITGA11Q9UKX5 1188 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 AGAP1Q9UPQ3 857 aa17.87■□□□□ 0.45
SHANK2-207ENST00000425049 ZNF233A6NK53 670 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 TNNC2P02585 160 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 TUFMP49411 452 aaKnown RBP17.86■□□□□ 0.45
SHANK2-207ENST00000425049 TSPY1Q01534 308 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 SMARCB1Q12824 385 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 BFSP1Q12934 665 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 MGAT5BQ3V5L5 792 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 WSCD1Q658N2 575 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 PHLDB3Q6NSJ2 640 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 UNC13DQ70J99 1090 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 ITIH5Q86UX2 942 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 CCDC105Q8IYK2 499 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 DCP1BQ8IZD4 617 aaKnown RBP17.86■□□□□ 0.45
SHANK2-207ENST00000425049 CSGALNACT2Q8N6G5 542 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 LRRC52Q8N7C0 313 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 GLIS3Q8NEA6 775 aa17.86■□□□□ 0.45
SHANK2-207ENST00000425049 ZSWIM2Q8NEG5 633 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms