RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 SCPEP1Q9HB40 452 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 KCNH7Q9NS40 1196 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 YKT6O15498 198 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 XPOTO43592 962 aaKnown RBP9.04□□□□□ -0.96
VPS8-204ENST00000424463 EYA4O95677 639 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 LSP1P33241 339 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 HOXD13P35453 343 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 USP14P54578 494 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 MARSP56192 900 aaKnown RBP9.04□□□□□ -0.96
VPS8-204ENST00000424463 ETF1P62495 437 aaKnown RBP9.04□□□□□ -0.96
VPS8-204ENST00000424463 LRRC74AQ0VAA2 488 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 SSPNQ14714 243 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 ZCWPW2Q504Y3 356 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 SNX30Q5VWJ9 437 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 FCRLBQ6BAA4 426 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 NSMFQ6X4W1 530 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 APOBEC3FQ8IUX4 373 aaKnown RBP9.04□□□□□ -0.96
VPS8-204ENST00000424463 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.04□□□□□ -0.96
VPS8-204ENST00000424463 LSMEM1Q8N8F7 131 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 DIS3LQ8TF46 1054 aaKnown RBP9.04□□□□□ -0.96
VPS8-204ENST00000424463 KLRG1Q96E93 195 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 PCMTD1Q96MG8 357 aaPredicted RBP9.04□□□□□ -0.96
VPS8-204ENST00000424463 IKZF4Q9H2S9 585 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 UBN1Q9NPG3 1134 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 SATB2Q9UPW6 733 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 FAM32AQ9Y421 112 aaKnown RBP9.04□□□□□ -0.96
VPS8-204ENST00000424463 TELO2Q9Y4R8 837 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 NOX1Q9Y5S8 564 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 ADGRG1Q9Y653 693 aa9.04□□□□□ -0.96
VPS8-204ENST00000424463 RPTORQ8N122 1335 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 IGF2BP3O00425 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS8-204ENST00000424463 PEX10O60683 326 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 PRPF6O94906 941 aaKnown RBP9.03□□□□□ -0.96
VPS8-204ENST00000424463 MYBP10242 640 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 MYCLP12524 364 aaPredicted RBP9.03□□□□□ -0.96
VPS8-204ENST00000424463 POLR2EP19388 210 aaKnown RBP9.03□□□□□ -0.96
VPS8-204ENST00000424463 GNL1P36915 607 aaPredicted RBP9.03□□□□□ -0.96
VPS8-204ENST00000424463 CD86P42081 329 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 SEPHS1P49903 392 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 USP46P62068 366 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 PDE1BQ01064 536 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 LRRC63Q05C16 580 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 RUNX1T1Q06455 604 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 ITGB3BPQ13352 177 aaPredicted RBP9.03□□□□□ -0.96
VPS8-204ENST00000424463 TKFCQ3LXA3 575 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 CCDC40Q4G0X9 1142 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 CEP78Q5JTW2 689 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 PPP2R2DQ66LE6 453 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 RINT1Q6NUQ1 792 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 CCDC62Q6P9F0 684 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 GPIHBP1Q8IV16 184 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 SCAIQ8N9R8 606 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 OR8H1Q8NGG4 311 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 DQX1Q8TE96 717 aaKnown RBP9.03□□□□□ -0.96
VPS8-204ENST00000424463 FATE1Q969F0 183 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 WDR24Q96S15 920 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 TSG101Q99816 390 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 NTPCRQ9BSD7 190 aaKnown RBP9.03□□□□□ -0.96
VPS8-204ENST00000424463 NDST4Q9H3R1 872 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 LZTFL1Q9NQ48 299 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 STARD7Q9NQZ5 370 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 CAPN11Q9UMQ6 739 aa9.03□□□□□ -0.96
VPS8-204ENST00000424463 PITPNM2Q9BZ72 1349 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.96
VPS8-204ENST00000424463 EPHB6O15197 1021 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 SPTLC1O15269 473 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 DHX15O43143 795 aaKnown RBP9.02□□□□□ -0.96
VPS8-204ENST00000424463 SHOX2O60902 331 aaPredicted RBP9.02□□□□□ -0.96
VPS8-204ENST00000424463 USP2O75604 605 aaPredicted RBP9.02□□□□□ -0.96
VPS8-204ENST00000424463 CLTAP09496 248 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 AP3M2P53677 418 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 BAATQ14032 418 aaPredicted RBP9.02□□□□□ -0.96
VPS8-204ENST00000424463 NFE2L1Q14494 772 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 FAM26DQ5JW98 314 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 DUS1LQ6P1R4 473 aaKnown RBP9.02□□□□□ -0.96
VPS8-204ENST00000424463 WDR59Q6PJI9 974 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 CCDC81Q6ZN84 652 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 TRMT1LQ7Z2T5 733 aaKnown RBP9.02□□□□□ -0.96
VPS8-204ENST00000424463 STK32AQ8WU08 396 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 CCDC51Q96ER9 411 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 CCDC42Q96M95 316 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 NUP58Q9BVL2 599 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 TEKT3Q9BXF9 490 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 NAA15Q9BXJ9 866 aaKnown RBP9.02□□□□□ -0.96
VPS8-204ENST00000424463 TUFT1Q9NNX1 390 aa9.02□□□□□ -0.96
VPS8-204ENST00000424463 ATAD5Q96QE3 1844 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.02□□□□□ -0.97
VPS8-204ENST00000424463 TRPA1O75762 1119 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 APOEP02649 317 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 KRT13P13646 458 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 CTRB1P17538 263 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 FECHP22830 423 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 VAMP1P23763 118 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 RPL9P32969 192 aaKnown RBP9.02□□□□□ -0.97
VPS8-204ENST00000424463 CSTF2P33240 577 aaKnown RBP eCLIP9.02□□□□□ -0.97
VPS8-204ENST00000424463 GNG11P61952 73 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 FKBP3Q00688 224 aaKnown RBP9.02□□□□□ -0.97
VPS8-204ENST00000424463 TRIM14Q14142 442 aa9.02□□□□□ -0.97
VPS8-204ENST00000424463 MTERF2Q49AM1 385 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms