RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 P3H1Q32P28 736 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-204ENST00000424143 CLEC4DQ8WXI8 215 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 C8orf37Q96NL8 207 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 TBC1D10AQ9BXI6 508 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 DCLRE1BQ9H816 532 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 MLXIPLQ9NP71 852 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 KMT5AQ9NQR1 393 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 PDLIM7Q9NR12 457 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 DDX56Q9NY93 547 aaKnown RBP16.09■□□□□ 0.17
C9orf3-204ENST00000424143 ZMYND8Q9ULU4 1186 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-204ENST00000424143 TRIM33Q9UPN9 1127 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 PCDHAC2Q9Y5I4 1007 aa16.09■□□□□ 0.17
C9orf3-204ENST00000424143 DENND3A2RUS2 1198 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 MAFGO15525 162 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 TOM1O60784 492 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 DNAJC6O75061 913 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 NEBLO76041 1014 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 TGDSO95455 350 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 C4BPAP04003 597 aaKnown RBP16.08■□□□□ 0.17
C9orf3-204ENST00000424143 TBXAS1P24557 533 aaPredicted RBP16.08■□□□□ 0.17
C9orf3-204ENST00000424143 VCPP55072 806 aaKnown RBP16.08■□□□□ 0.17
C9orf3-204ENST00000424143 OASLQ15646 514 aaKnown RBP16.08■□□□□ 0.17
C9orf3-204ENST00000424143 XKR9Q5GH70 373 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 RNASEH2BQ5TBB1 312 aaKnown RBP16.08■□□□□ 0.17
C9orf3-204ENST00000424143 FYB2Q5VWT5 728 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 MAEAQ7L5Y9 396 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 APBB1IPQ7Z5R6 666 aaPredicted RBP16.08■□□□□ 0.17
C9orf3-204ENST00000424143 LMNTD2Q8IXW0 634 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 MCPH1Q8NEM0 835 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 TDRD3Q9H7E2 651 aaKnown RBP16.08■□□□□ 0.17
C9orf3-204ENST00000424143 DBNDD1Q9H9R9 158 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 ZFATQ9P243 1243 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 TBK1Q9UHD2 729 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 PSME4Q14997 1843 aa16.08■□□□□ 0.17
C9orf3-204ENST00000424143 IBSPP21815 317 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-204ENST00000424143 PHBP35232 272 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 MRPS9P82933 396 aaKnown RBP16.08■□□□□ 0.16
C9orf3-204ENST00000424143 MAP3K10Q02779 954 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 SPP2Q13103 211 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 MTMR1Q13613 665 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 FAM102BQ5T8I3 360 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 HHATQ5VTY9 493 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 STYK1Q6J9G0 422 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 GSTA5Q7RTV2 222 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 NIPA2Q8N8Q9 360 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 POMGNT1Q8WZA1 660 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 ZNF75CPQ92670 426 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-204ENST00000424143 SAAL1Q96ER3 474 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 SLITRK1Q96PX8 696 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 KIAA1683Q9H0B3 1180 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 MMADHCQ9H3L0 296 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-204ENST00000424143 COL20A1Q9P218 1284 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 USP21Q9UK80 565 aa16.08■□□□□ 0.16
C9orf3-204ENST00000424143 TMEM191CA6NGB0 347 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 E7ESA3 106 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
C9orf3-204ENST00000424143 NPTXRO95502 500 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 LSM8O95777 96 aaKnown RBP16.07■□□□□ 0.16
C9orf3-204ENST00000424143 PIGRP01833 764 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 TMEM191BP0C7N4 346 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 TROVE2P10155 538 aaKnown RBP eCLIP16.07■□□□□ 0.16
C9orf3-204ENST00000424143 MARK3P27448 753 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 CAP2P40123 477 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 GEMIN4P57678 1058 aaKnown RBP16.07■□□□□ 0.16
C9orf3-204ENST00000424143 SF3A3Q12874 501 aaKnown RBP eCLIP16.07■□□□□ 0.164e-10■■■□□ 16.5
C9orf3-204ENST00000424143 DNAJC3Q13217 504 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 KRT72Q14CN4 511 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 PKN2Q16513 984 aaKnown RBP16.07■□□□□ 0.16
C9orf3-204ENST00000424143 TSNAXIP1Q2TAA8 658 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 ADGRD1Q6QNK2 874 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 FAM47EQ6ZV65 393 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 LONP2Q86WA8 852 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 CCDC125Q86Z20 511 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 CPA5Q8WXQ8 436 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 SPDL1Q96EA4 605 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 HEMGNQ9BXL5 484 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 MAF1Q9H063 256 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 ANKFY1Q9P2R3 1169 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 TCEAL9Q9UHQ7 104 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 CCPG1Q9ULG6 757 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 BCS1LQ9Y276 419 aa16.07■□□□□ 0.16
C9orf3-204ENST00000424143 CALB1P05937 261 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 PECAM1P16284 738 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-204ENST00000424143 KRT15P19012 456 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 DSG3P32926 999 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 ABL2P42684 1182 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 CUL2Q13617 745 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 CTC1Q2NKJ3 1217 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 C11orf91Q3C1V1 193 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 OTOAQ7RTW8 1153 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 POLNQ7Z5Q5 900 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 CHSY1Q86X52 802 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 RBBP8NLQ8NC74 664 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-204ENST00000424143 SLC35B2Q8TB61 432 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-204ENST00000424143 ZNF516Q92618 1163 aa16.06■□□□□ 0.16
C9orf3-204ENST00000424143 PRMT6Q96LA8 375 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms