RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CPLX1O14810 134 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 B3GALT2O43825 422 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 NRP2O60462 931 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 PRPF6O94906 941 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 ARIH2O95376 493 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 MYL1P05976 194 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 GZMAP12544 262 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 ATF7P17544 494 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 BMP5P22003 454 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CHMLP26374 656 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 RCAN1P53805 252 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CBX1P83916 185 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 GRIK3Q13003 919 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 NFE2Q16621 373 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 FAM83BQ5T0W9 1011 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CFAP58Q5T655 872 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CCDC30Q5VVM6 783 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CREB3L3Q68CJ9 461 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 PPP4R4Q6NUP7 873 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 ESRP1Q6NXG1 681 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 CFAP161Q6P656 301 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CCDC129Q6ZRS4 1044 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 SRLQ86TD4 932 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 FAM83AQ86UY5 434 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 RPAP2Q8IXW5 612 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 PEX5LQ8IYB4 626 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 SPICE1Q8N0Z3 855 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 VPS52Q8N1B4 723 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 MB21D1Q8N884 522 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 MAML1Q92585 1016 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 USP6NLQ92738 828 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 SKA1Q96BD8 255 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 NAF1Q96HR8 494 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 DHTKD1Q96HY7 919 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 GPR101Q96P66 508 aaPredicted RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 UTP14AQ9BVJ6 771 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 CAPS2Q9BXY5 557 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 CCDC68Q9H2F9 335 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 MTG2Q9H4K7 406 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 INTS7Q9NVH2 962 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 ZNHIT6Q9NWK9 470 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 JRKLQ9Y4A0 524 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 TNPO3Q9Y5L0 923 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 SNX5Q9Y5X3 404 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 KANK1Q14678 1352 aa3.22□□□□□ -1.89
PMS1-209ENST00000424059 BAZ1BQ9UIG0 1483 aaKnown RBP3.22□□□□□ -1.89
PMS1-209ENST00000424059 GAGE12BA1L429 117 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 GRID2IPA4D2P6 1211 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 GAGE12HA6NDE8 117 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 C2orf81A6NN90 581 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 RASA4O43374 803 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 FAM20BO75063 409 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 INMTO95050 263 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 GAAP10253 952 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 SFTPCP11686 197 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 HNRNPLP14866 589 aaKnown RBP eCLIP3.21□□□□□ -1.93e-6■■■□□ 15.5
PMS1-209ENST00000424059 CA8P35219 290 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 PRPHP41219 470 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 NUCB1Q02818 461 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 ICA1Q05084 483 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 ACAP1Q15027 740 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 CNGA3Q16281 694 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 ATP2B3Q16720 1220 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 TIGD2Q4W5G0 525 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 BRDTQ58F21 947 aaPredicted RBP3.21□□□□□ -1.9
PMS1-209ENST00000424059 CCDC122Q5T0U0 273 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 PIK3R6Q5UE93 754 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 GALNT17Q6IS24 598 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 BEND5Q7L4P6 421 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 OR8H2Q8N162 312 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 EFHBQ8N7U6 833 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 TBC1D5Q92609 795 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 HPS3Q969F9 1004 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 MYEOVQ96EZ4 313 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 SCLT1Q96NL6 688 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 MOGAT1Q96PD6 335 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 FAM193BQ96PV7 902 aaPredicted RBP3.21□□□□□ -1.9
PMS1-209ENST00000424059 DCLRE1CQ96SD1 692 aaKnown RBP3.21□□□□□ -1.9
PMS1-209ENST00000424059 SH3GL1Q99961 368 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 WNT8AQ9H1J5 351 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 TOR3AQ9H497 397 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 PDRG1Q9NUG6 133 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 NCDNQ9UBB6 729 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.21□□□□□ -1.9
PMS1-209ENST00000424059 PA2G4Q9UQ80 394 aaKnown RBP3.21□□□□□ -1.9
PMS1-209ENST00000424059 ZKSCAN5Q9Y2L8 839 aa3.21□□□□□ -1.9
PMS1-209ENST00000424059 ST20-MTHFSA0A0A6YYL1 179 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 DIRC3C9JPN6 131 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 M0QX08 132 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 ELL2O00472 640 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 HOXA3O43365 443 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 SMC2O95347 1197 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 HSPA1AP0DMV8 641 aaKnown RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 HSPA1BP0DMV9 641 aaKnown RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 LAG3P18627 525 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 CD9P21926 228 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 TGM1P22735 817 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 HPDP32754 393 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 BLOC1S1P78537 153 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 ROR1Q01973 937 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms