RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ADCY1Q08828 1119 aa19.27■□□□□ 0.68
SBDSP1-202ENST00000423945 STK4Q13043 487 aa19.27■□□□□ 0.68
SBDSP1-202ENST00000423945 MTMR3Q13615 1198 aa19.27■□□□□ 0.68
SBDSP1-202ENST00000423945 KMT5BQ4FZB7 885 aa19.27■□□□□ 0.68
SBDSP1-202ENST00000423945 LMBRD2Q68DH5 695 aaPredicted RBP19.27■□□□□ 0.68
SBDSP1-202ENST00000423945 OVOS1Q6IE37 1185 aa19.27■□□□□ 0.68
SBDSP1-202ENST00000423945 CYP4F11Q9HBI6 524 aa19.27■□□□□ 0.68
SBDSP1-202ENST00000423945 ZDBF2Q9HCK1 2354 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 PRRG1O14668 218 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 PDGFBP01127 241 aaPredicted RBP19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 ITGB3P05106 788 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 ODC1P11926 461 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 CPB1P15086 417 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 POLR2BP30876 1174 aaKnown RBP19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 SYKP43405 635 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 SLC5A9Q2M3M2 681 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 USP37Q86T82 979 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 UBALD2Q8IYN6 164 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 FSIP1Q8NA03 581 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 ST13P5Q8NFI4 369 aaPredicted RBP19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 OR5B17Q8NGF7 314 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 OR10T2Q8NGX3 314 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 USP25Q9UHP3 1055 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 SIX4Q9UIU6 781 aa19.26■□□□□ 0.67
SBDSP1-202ENST00000423945 WDFY4Q6ZS81 3184 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 ZNF233A6NK53 670 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 OR6C75A6NL08 312 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 KPNA7A9QM74 516 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 ANHXE9PGG2 379 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 CYB561D2O14569 222 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 ELF1P32519 619 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 GPR17Q13304 367 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 MYBPC2Q14324 1141 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 PBXIP1Q96AQ6 731 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 PGLYRP2Q96PD5 576 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 OXCT2Q9BYC2 517 aaPredicted RBP19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 MTMR12Q9C0I1 747 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 GZF1Q9H116 711 aaPredicted RBP19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 CEP72Q9P209 647 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 IGSF9Q9P2J2 1179 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 AGAP1Q9UPQ3 857 aa19.25■□□□□ 0.67
SBDSP1-202ENST00000423945 MTMR11A4FU01 709 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 NARSO43776 548 aaKnown RBP19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 LRG1P02750 347 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 RHOP08100 348 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 TDGQ13569 410 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 HTR4Q13639 388 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 KNOP1Q1ED39 458 aaKnown RBP19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 PABPC1LQ4VXU2 614 aaKnown RBP19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 WSCD1Q658N2 575 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 KRBA2Q6ZNG9 492 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 C12orf56Q8IXR9 622 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 TTC9BQ8N6N2 239 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 RDH13Q8NBN7 331 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 CACTINQ8WUQ7 758 aaKnown RBP19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 FGF13Q92913 245 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 AVENQ9NQS1 362 aaPredicted RBP19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 INTS13Q9NVM9 706 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 CDH7Q9ULB5 785 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 MAFFQ9ULX9 164 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 DUSP12Q9UNI6 340 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 YIPF1Q9Y548 306 aa19.24■□□□□ 0.67
SBDSP1-202ENST00000423945 TULP1O00294 542 aaPredicted RBP19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 CCR2P41597 374 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 CYP2J2P51589 502 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 SNRPFP62306 86 aaKnown RBP19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 NUCB2P80303 420 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 TWF1Q12792 350 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 DPYDQ12882 1025 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 SNRNP35Q16560 246 aaKnown RBP19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 SV2CQ496J9 727 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 PRSS36Q5K4E3 855 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 CENPPQ6IPU0 288 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 NPAS3Q8IXF0 933 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 SLC44A3Q8N4M1 653 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 CSGALNACT2Q8N6G5 542 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 LRRC52Q8N7C0 313 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 FGF14Q92915 247 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 ZNF560Q96MR9 790 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 RPP25Q9BUL9 199 aaKnown RBP19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 DNAJC25Q9H1X3 360 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 KIAA1586Q9HCI6 787 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 EXOC1Q9NV70 894 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 ITGA11Q9UKX5 1188 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 L1RE1Q9UN81 338 aa19.23■□□□□ 0.67
SBDSP1-202ENST00000423945 MUC6Q6W4X9 2439 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 ZNF202O95125 648 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 RPN1P04843 607 aaKnown RBP19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 MYL1P05976 194 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 TMEM191BP0C7N4 346 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 CEBPBP17676 345 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 PTPN2P17706 415 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 PNPLA4P41247 253 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 CDR1P51861 262 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 CYP24A1Q07973 514 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 DUSP4Q13115 394 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 PSMD2Q13200 908 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 PARM1Q6UWI2 310 aa19.22■□□□□ 0.67
SBDSP1-202ENST00000423945 LRRTM3Q86VH5 581 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms