RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 PASD1Q8IV76 773 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 CD302Q8IX05 232 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 TMEM192Q8IY95 271 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 UBR7Q8N806 425 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 TMEM35BQ8NCS4 154 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 AENQ8WTP8 325 aaKnown RBP9.61□□□□□ -0.87
SNX20-203ENST00000423026 IFT81Q8WYA0 676 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNX20-203ENST00000423026 ZNF518BQ9C0D4 1074 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 GDF3Q9NR23 364 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 NXF1Q9UBU9 619 aaKnown RBP9.61□□□□□ -0.87
SNX20-203ENST00000423026 SUFUQ9UMX1 484 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 GINS2Q9Y248 185 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 Q9Y3F1 56 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 PCDHA3Q9Y5H8 950 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 CITO14578 2027 aa9.61□□□□□ -0.87
SNX20-203ENST00000423026 SMIM35A0A1B0GVV1 85 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 LSM8O95777 96 aaKnown RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 GLI1P08151 1106 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 NFICP08651 508 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 SLC10A3P09131 477 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 WEE2P0C1S8 567 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 CYP2C9P11712 490 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 CTNNA1P35221 906 aaKnown RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 RWDD2BP57060 319 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 LACTBP83111 547 aaPredicted RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 C1QBPQ07021 282 aaKnown RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 ZNF211Q13398 564 aaPredicted RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 MFSD10Q14728 455 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 TMEM132DQ14C87 1099 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 KIZQ2M2Z5 673 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 ZNF394Q53GI3 561 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 DCAF12L1Q5VU92 463 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 SCARA5Q6ZMJ2 495 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 SND1Q7KZF4 910 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNX20-203ENST00000423026 MON1BQ7L1V2 547 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 CATSPER4Q7RTX7 472 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 GSPT2Q8IYD1 628 aaKnown RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 ALG3Q92685 438 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 BTBD6Q96KE9 485 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 APBA2Q99767 749 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 C11orf70Q9BRQ4 267 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 KATNAL1Q9BW62 490 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 FAM49AQ9H0Q0 323 aaPredicted RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 DDX47Q9H0S4 455 aaKnown RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 XYLT2Q9H1B5 865 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 FLRT1Q9NZU1 646 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNX20-203ENST00000423026 MED7O43513 233 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 RNF40O75150 1001 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 ITGB3P05106 788 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 CALB1P05937 261 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 MYL3P08590 195 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 MYBL2P10244 700 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 ASPAP45381 313 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 PSEN2P49810 448 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 PEX5P50542 639 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 SLC10A6Q3KNW5 377 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 WDR72Q3MJ13 1102 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 EIF1ADQ8N9N8 165 aaKnown RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.6□□□□□ -0.87
SNX20-203ENST00000423026 USP6NLQ92738 828 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 KRT35Q92764 455 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 CD101Q93033 1021 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 PARVAQ9NVD7 372 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 C2CD2Q9Y426 696 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 MROH7Q68CQ1 1323 aa9.6□□□□□ -0.87
SNX20-203ENST00000423026 GNAT1P11488 350 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 ITGA4P13612 1032 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
SNX20-203ENST00000423026 GRM5P41594 1212 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 CARSP49589 748 aaKnown RBP9.59□□□□□ -0.87
SNX20-203ENST00000423026 RBP5P82980 135 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 NNTQ13423 1086 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 CUL1Q13616 776 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 CCL14Q16627 93 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 KAT2BQ92831 832 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 CAVIN3Q969G5 261 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 GDAP1L1Q96MZ0 367 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 ADAMTS10Q9H324 1103 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 CYP3A43Q9HB55 503 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 SIX4Q9UIU6 781 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 ITGA11Q9UKX5 1188 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 NFU1Q9UMS0 254 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
SNX20-203ENST00000423026 UTP11Q9Y3A2 253 aaKnown RBP9.59□□□□□ -0.87
SNX20-203ENST00000423026 ATXN2Q99700 1313 aaKnown RBP9.59□□□□□ -0.87
SNX20-203ENST00000423026 MBLAC1A4D2B0 266 aaPredicted RBP9.58□□□□□ -0.88
SNX20-203ENST00000423026 PROSCO94903 275 aa9.58□□□□□ -0.88
SNX20-203ENST00000423026 NPTXRO95502 500 aa9.58□□□□□ -0.88
SNX20-203ENST00000423026 CFHP08603 1231 aa9.58□□□□□ -0.88
SNX20-203ENST00000423026 PAEPP09466 180 aa9.58□□□□□ -0.88
SNX20-203ENST00000423026 CD19P15391 556 aa9.58□□□□□ -0.88
SNX20-203ENST00000423026 MMP8P22894 467 aa9.58□□□□□ -0.88
SNX20-203ENST00000423026 EIF4BP23588 611 aaKnown RBP9.58□□□□□ -0.88
SNX20-203ENST00000423026 YARSP54577 528 aaKnown RBP9.58□□□□□ -0.88
SNX20-203ENST00000423026 TMEM62Q0P6H9 643 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms