RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 KLHL23Q8NBE8 558 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 NEK11Q8NG66 645 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 SUSD3Q96L08 255 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 MMS19Q96T76 1030 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 MRPL45Q9BRJ2 306 aaKnown RBP13.75□□□□□ -0.21
ATG4B-208ENST00000419606 NAA15Q9BXJ9 866 aaKnown RBP13.75□□□□□ -0.21
ATG4B-208ENST00000419606 IMPG2Q9BZV3 1241 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 TTYH3Q9C0H2 523 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 NLRC4Q9NPP4 1024 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 SPG21Q9NZD8 308 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 DNAJC12Q9UKB3 198 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 M0QZQ0 153 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 FGF18O76093 207 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 CALCAP01258 141 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 GYPCP04921 128 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 TPM3P06753 285 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 UCHL3P15374 230 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 CD58P19256 250 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 ACO1P21399 889 aaKnown RBP13.74□□□□□ -0.21
ATG4B-208ENST00000419606 TNNC1P63316 161 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 ORC1Q13415 861 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 PDCL2Q8N4E4 241 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 UBR7Q8N806 425 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 CCDC150Q8NCX0 1101 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 CPLX3Q8WVH0 158 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 KBTBD7Q8WVZ9 684 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 LPIN3Q9BQK8 851 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 BCO2Q9BYV7 579 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 GPR88Q9GZN0 384 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 ALG13Q9NP73 1137 aaKnown RBP13.74□□□□□ -0.21
ATG4B-208ENST00000419606 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 MSRAQ9UJ68 235 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 PCDHB12Q9Y5F1 795 aa13.74□□□□□ -0.21
ATG4B-208ENST00000419606 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-208ENST00000419606 ITIH6Q6UXX5 1313 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 CSPG5O95196 566 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 DNAJB2P25686 324 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 LMO2P25791 158 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 FXR1P51114 621 aaKnown RBP eCLIP13.73□□□□□ -0.21
ATG4B-208ENST00000419606 CDR1P51861 262 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-208ENST00000419606 RAPGEF1Q13905 1077 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 DRAP1Q14919 205 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-208ENST00000419606 FAM171A1Q5VUB5 890 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 SPECC1LQ69YQ0 1117 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 CEP57Q86XR8 500 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-208ENST00000419606 SPC24Q8NBT2 197 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 BAP1Q92560 729 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 TMEM169Q96HH4 297 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 TWNKQ96RR1 684 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 AAASQ9NRG9 546 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 CISHQ9NSE2 258 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 PCDHB8Q9UN66 801 aa13.73□□□□□ -0.21
ATG4B-208ENST00000419606 SF3B1O75533 1304 aaKnown RBP eCLIP13.72□□□□□ -0.21
ATG4B-208ENST00000419606 EPOPA6NHQ4 379 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 FOXN3O00409 490 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-208ENST00000419606 HUS1O60921 280 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 ODC1P11926 461 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
ATG4B-208ENST00000419606 DNAJB1P25685 340 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 CDC25BP30305 580 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 CASP14P31944 242 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 ERVK-21P61565 698 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 GCNT1Q02742 428 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 RAB30Q15771 203 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 CCDC142Q17RM4 750 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 RTP2Q5QGT7 225 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 ADGRF2Q8IZF7 708 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 TOP6BLQ8N6T0 577 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 APPL2Q8NEU8 664 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 WHAMMQ8TF30 809 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 AUTS2Q8WXX7 1259 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 TGS1Q96RS0 853 aaKnown RBP13.72□□□□□ -0.21
ATG4B-208ENST00000419606 TMEM209Q96SK2 561 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 RTP3Q9BQQ7 232 aa13.72□□□□□ -0.21
ATG4B-208ENST00000419606 RFXAPO00287 272 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 GRM6O15303 877 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 TRAPPC3O43617 180 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 TACC1O75410 805 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 CYP11A1P05108 521 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 PDGFRBP09619 1106 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 P4HA1P13674 534 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 FGFR3P22607 806 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 WARSP23381 471 aaKnown RBP13.71□□□□□ -0.21
ATG4B-208ENST00000419606 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-208ENST00000419606 ACAT1P24752 427 aaKnown RBP13.71□□□□□ -0.21
ATG4B-208ENST00000419606 PPM1AP35813 382 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 NDST1P52848 882 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 MFAP3P55082 362 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 JAM2P57087 298 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 ERVFC1P60507 584 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 SMAD3P84022 425 aaKnown RBP13.71□□□□□ -0.21
ATG4B-208ENST00000419606 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 ZNF394Q53GI3 561 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 VARS2Q5ST30 1063 aaKnown RBP13.71□□□□□ -0.21
ATG4B-208ENST00000419606 KIAA0319Q5VV43 1072 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 E4F1Q66K89 784 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-208ENST00000419606 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.21
ATG4B-208ENST00000419606 PRSS55Q6UWB4 352 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms