RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 FAM46AQ96IP4 442 aaKnown RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 ADAM2Q99965 735 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 HSD17B14Q9BPX1 270 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 JPH2Q9BR39 696 aaPredicted RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 C17orf80Q9BSJ5 609 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 DHX33Q9H6R0 707 aaKnown RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 GMIPQ9P107 970 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 SUCLA2Q9P2R7 463 aaPredicted RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 PRKAG3Q9UGI9 489 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 SMC3Q9UQE7 1217 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 PRRC2BQ5JSZ5 2229 aaKnown RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 RALGAPA2Q2PPJ7 1873 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 NLRC5Q86WI3 1866 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 A0A087WZ62 844 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 DENND3A2RUS2 1198 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 KRBA1A5PL33 1030 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 UPK3BL1B0FP48 263 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 CHURC1-FNTBB4DL54 471 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 UPK3BL2E5RIL1 263 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 H3BQV1 296 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 LPXNO60711 386 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 DGKIO75912 1065 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 LINC00271P0C7V0 271 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 STAG3L1P0CL83 205 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 DARSP14868 501 aaKnown RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 POU3F3P20264 500 aaPredicted RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 IBSPP21815 317 aaPredicted RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 TECP42680 631 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 SARSP49591 514 aaKnown RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 DNM2P50570 870 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 GRB10Q13322 594 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 CUL4AQ13619 759 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 NKG7Q16617 165 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 XKR9Q5GH70 373 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 MCTP1Q6DN14 999 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 OVOS1Q6IE37 1185 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 OTUD6AQ7L8S5 288 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 ZNF410Q86VK4 478 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 RHPN2Q8IUC4 686 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 HID1Q8IV36 788 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 EXOC8Q8IYI6 725 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 SMYD4Q8IYR2 804 aaPredicted RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 C4orf32Q8N8J7 132 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 SLC17A8Q8NDX2 589 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 OR6P1Q8NGX9 317 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 HNRNPLLQ8WVV9 542 aaKnown RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 TMEM143Q96AN5 459 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 ZNF689Q96CS4 500 aaPredicted RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 MEGF10Q96KG7 1140 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 NLRP4Q96MN2 994 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 CCDC43Q96MW1 224 aaKnown RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 FDXACB1Q9BRP7 624 aaPredicted RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 GCOM2Q9BZD3 368 aaPredicted RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 SSU72Q9NP77 194 aaKnown RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 RGS18Q9NS28 235 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 C1orf112Q9NSG2 853 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 TJP2Q9UDY2 1190 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.69□□□□□ -1.18
HMGN1-205ENST00000419378 PCDHB6Q9Y5E3 794 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 CUL9Q8IWT3 2517 aa7.69□□□□□ -1.18
HMGN1-205ENST00000419378 A0A087WWV3 80 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 MEIS3P2A8K0S8 358 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 C9IYK1 514 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 MED24O75448 989 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 FGFR4P22455 802 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 SFPQP23246 707 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGN1-205ENST00000419378 CTNNB1P35222 781 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 CHRNA4P43681 627 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 RARRES1P49788 294 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 GATMP50440 423 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 CDC42EP1Q00587 391 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 BTG3Q14201 252 aaPredicted RBP7.68□□□□□ -1.18
HMGN1-205ENST00000419378 EPC2Q52LR7 807 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 RILPL1Q5EBL4 403 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 LARP1BQ659C4 914 aaKnown RBP7.68□□□□□ -1.18
HMGN1-205ENST00000419378 HAUS3Q68CZ6 603 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 CDPF1Q6NVV7 123 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 SLC24A5Q71RS6 500 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 DPH6Q7L8W6 267 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 CATSPER3Q86XQ3 398 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 TMEM192Q8IY95 271 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 CMTR2Q8IYT2 770 aaKnown RBP7.68□□□□□ -1.18
HMGN1-205ENST00000419378 FIBCD1Q8N539 461 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 PRPF31Q8WWY3 499 aaKnown RBP7.68□□□□□ -1.18
HMGN1-205ENST00000419378 PSPC1Q8WXF1 523 aaKnown RBP7.68□□□□□ -1.18
HMGN1-205ENST00000419378 PPM1EQ8WY54 764 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 SAMD11Q96NU1 681 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 POLR3CQ9BUI4 534 aaPredicted RBP7.68□□□□□ -1.18
HMGN1-205ENST00000419378 TUFT1Q9NNX1 390 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 XPNPEP1Q9NQW7 623 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 ANKEF1Q9NU02 776 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 COL4A3BPQ9Y5P4 624 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 MTCH2Q9Y6C9 303 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 MRPL42Q9Y6G3 142 aaKnown RBP7.68□□□□□ -1.18
HMGN1-205ENST00000419378 KIAA1671Q9BY89 1806 aa7.68□□□□□ -1.18
HMGN1-205ENST00000419378 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 C5orf67F2Z3F1 127 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 H3BNC9 293 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms