RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 TBC1D10CQ8IV04 446 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 WDR48Q8TAF3 677 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 FAM151AQ8WW52 585 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 HOOK2Q96ED9 719 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 JAKMIP1Q96N16 626 aaKnown RBP6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 CLIC6Q96NY7 704 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 BTBD2Q9BX70 525 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 SLC13A1Q9BZW2 595 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 TM6SF1Q9BZW5 370 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 RNF41Q9H4P4 317 aaPredicted RBP6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 MKS1Q9NXB0 559 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 PPP2R3BQ9Y5P8 575 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 CNTNAP1P78357 1384 aa6.81□□□□□ -1.32
NIFKP3-201ENST00000417799 ASTN2O75129 1339 aaPredicted RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 PRSS38A1L453 326 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 TRIM75PA6NK02 468 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ORC4O43929 436 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 HLA-DOAP06340 250 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 RBP3P10745 1247 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 PCP11498 1178 aaKnown RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 VEGFAP15692 232 aaPredicted RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 CASTP20810 708 aaKnown RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ENPP1P22413 925 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 LIMS1P48059 325 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 RAB27AP51159 221 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 TRDNQ13061 729 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ADAM9Q13443 819 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 PCBP2Q15366 365 aaKnown RBP eCLIP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 UGT8Q16880 541 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 SLC4A8Q2Y0W8 1093 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ZBTB41Q5SVQ8 909 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 PHF19Q5T6S3 580 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 CCDC62Q6P9F0 684 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 RUFY3Q7L099 469 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 KANSL1Q7Z3B3 1105 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 PNMA8AQ86V59 439 aaPredicted RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 APOBEC3FQ8IUX4 373 aaKnown RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 FOXP4Q8IVH2 680 aaPredicted RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 NCOA7Q8NI08 942 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 DYNLL2Q96FJ2 89 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ZSWIM3Q96MP5 696 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 NOX5Q96PH1 765 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 NEK1Q96PY6 1258 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 TACO1Q9BSH4 297 aaKnown RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 C11orf84Q9BUA3 381 aaPredicted RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 KRT23Q9C075 422 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 TMEM39BQ9GZU3 492 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 WNT8AQ9H1J5 351 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 DEFB129Q9H1M3 183 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 TAF1DQ9H5J8 278 aaPredicted RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ZNF287Q9HBT7 754 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 CCM2LQ9NUG4 571 aaPredicted RBP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 PI4KBQ9UBF8 816 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 PGAP2Q9UHJ9 254 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ZFP69BQ9UJL9 534 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 CYP46A1Q9Y6A2 500 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ATRNL1Q5VV63 1379 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 ROBO3Q96MS0 1386 aa6.8□□□□□ -1.32
NIFKP3-201ENST00000417799 COL2A1P02458 1487 aaPredicted RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 NEDD4P46934 1319 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 E2F8A0AVK6 867 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 AKAP10O43572 662 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 RANBP6O60518 1105 aaKnown RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 PRDM1O75626 825 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 IL18BPO95998 194 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 CPA1P15085 419 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 RPS6KB1P23443 525 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 APEX1P27695 318 aaKnown RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 MCM5P33992 734 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 GABPAQ06546 454 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 PIN1Q13526 163 aaPredicted RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 NOLC1Q14978 699 aaKnown RBP eCLIP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 CLUL1Q15846 466 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 NFE2Q16621 373 aaPredicted RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 RRP12Q5JTH9 1297 aaKnown RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 BLOC1S2Q6QNY1 142 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 UNQ6494/PRO21346Q6UXR6 183 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 RALYLQ86SE5 291 aaKnown RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 FMNL3Q8IVF7 1028 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 MB21D2Q8IYB1 491 aaPredicted RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 KYQ8NBH2 561 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 DCPSQ96C86 337 aaKnown RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 TEPSINQ96N21 525 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 WRNIP1Q96S55 665 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 UPF3BQ9BZI7 483 aaKnown RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 OR10A5Q9H207 317 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 PDRG1Q9NUG6 133 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 GGA3Q9NZ52 723 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 SWAP70Q9UH65 585 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 SERPINB13Q9UIV8 391 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 SCAF8Q9UPN6 1271 aaKnown RBP6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 MRFAP1Q9Y605 127 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 WDR90Q96KV7 1748 aa6.79□□□□□ -1.32
NIFKP3-201ENST00000417799 BAZ2AQ9UIF9 1905 aaKnown RBP6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 SNUPNO95149 360 aaKnown RBP6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 SHMT1P34896 483 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 NT5C2P49902 561 aa6.78□□□□□ -1.32
NIFKP3-201ENST00000417799 BCAR1P56945 870 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms