RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.391e-10■■■□□ 15.7
UBR4-205ENST00000417040 STAP1Q9ULZ2 295 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 SATB2Q9UPW6 733 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 MYO5CQ9NQX4 1742 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 ARHGAP31Q2M1Z3 1444 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 TMCC1O94876 653 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 COPAP53621 1224 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 SNRNP35Q16560 246 aaKnown RBP12.6□□□□□ -0.39
UBR4-205ENST00000417040 IZUMO2Q6UXV1 221 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 BBS2Q9BXC9 721 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 CDV3Q9UKY7 258 aaKnown RBP12.6□□□□□ -0.39
UBR4-205ENST00000417040 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 ERBB3P21860 1342 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 SERPIND1P05546 499 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 NFKBIAP25963 317 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 THEMIS2Q5TEJ8 643 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 MTHFD1LQ6UB35 978 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 HORMAD1Q86X24 394 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 GIMAP8Q8ND71 665 aaPredicted RBP12.6□□□□□ -0.39
UBR4-205ENST00000417040 MPP4Q96JB8 637 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 SH3GL2Q99962 352 aa12.6□□□□□ -0.39
UBR4-205ENST00000417040 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 SGPL1O95470 568 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 BRD2P25440 801 aaKnown RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 CLK1P49759 484 aaKnown RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 TAP1Q03518 808 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 POTEAQ6S8J7 498 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 PRCCQ92733 491 aaPredicted RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 PAWRQ96IZ0 340 aaKnown RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 KLHL25Q9H0H3 589 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 NRKQ7Z2Y5 1582 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 C16orf96A6NNT2 1141 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 TRIM49D1C9J1S8 452 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 CYP27B1O15528 508 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 ALX1Q15699 326 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 AARS2Q5JTZ9 985 aaKnown RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 GPR141Q7Z602 305 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 MAGEB18Q96M61 343 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 CD209Q9NNX6 404 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 ZHX2Q9Y6X8 837 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 SAMD9LQ8IVG5 1584 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 PRR23D1E9PI22 279 aaPredicted RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 C21orf2O43822 256 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 CST8O60676 142 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 SASH3O75995 380 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 SNRPAP09012 282 aaKnown RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 PRR23D2P0DMB1 279 aaPredicted RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 OTUD4Q01804 1114 aaKnown RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 DUOXA2Q1HG44 320 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 SCUBE1Q8IWY4 988 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 SH3KBP1Q96B97 665 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 HIC2Q96JB3 615 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 TMEM120AQ9BXJ8 343 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 COA1Q9GZY4 146 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 SLC39A10Q9ULF5 831 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 ZSCAN5CA6NGD5 496 aaPredicted RBP12.59□□□□□ -0.39
UBR4-205ENST00000417040 MYO1DO94832 1006 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 USP11P51784 963 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 ENOSF1Q7L5Y1 443 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 RRM2BQ7LG56 351 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 RNF149Q8NC42 400 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 ENGASEQ8NFI3 743 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 ELMO3Q96BJ8 720 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 ASIC4Q96FT7 647 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 SPATA33Q96N06 139 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 EHD4Q9H223 541 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 CD274Q9NZQ7 290 aa12.59□□□□□ -0.39
UBR4-205ENST00000417040 CYTH3O43739 400 aa12.58□□□□□ -0.39
UBR4-205ENST00000417040 ACADSP16219 412 aa12.58□□□□□ -0.39
UBR4-205ENST00000417040 PPP3CCP48454 512 aa12.58□□□□□ -0.39
UBR4-205ENST00000417040 MAPK10P53779 464 aa12.58□□□□□ -0.39
UBR4-205ENST00000417040 KRT76Q01546 638 aa12.58□□□□□ -0.39
UBR4-205ENST00000417040 DDHD1Q8NEL9 900 aa12.58□□□□□ -0.39
UBR4-205ENST00000417040 USP13Q92995 863 aaPredicted RBP12.58□□□□□ -0.39
UBR4-205ENST00000417040 UVRAGQ9P2Y5 699 aa12.58□□□□□ -0.39
UBR4-205ENST00000417040 MED14O60244 1454 aa12.58□□□□□ -0.39
UBR4-205ENST00000417040 GLI1P08151 1106 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 GTF2H1P32780 548 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 MAP3K7CLP57077 242 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 ACBD5Q5T8D3 534 aaPredicted RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 PATL1Q86TB9 770 aaKnown RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 UNKQ9C0B0 810 aaKnown RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 CCSER1Q9C0I3 900 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 DDX18Q9NVP1 670 aaKnown RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 USE1Q9NZ43 259 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 PDP2Q9P2J9 529 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 HSPA1AP0DMV8 641 aaKnown RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 HSPA1BP0DMV9 641 aaKnown RBP12.58□□□□□ -0.4
UBR4-205ENST00000417040 DMPKQ09013 629 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 ATP1A4Q13733 1029 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 SPDYE7PQ495Y7 208 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 GLMNQ92990 594 aa12.58□□□□□ -0.4
UBR4-205ENST00000417040 SERPINB12Q96P63 405 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms