RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 RRN3P2A6NIE6 340 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 NFIBO00712 420 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 DDHD2O94830 711 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 DNAJB2P25686 324 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ARHGEF7Q14155 803 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 LRRC8EQ6NSJ5 796 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 EML4Q9HC35 981 aaKnown RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ARHGAP10A1A4S6 786 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 FDPSP14324 419 aaKnown RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 CCDC157Q569K6 752 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ECT2Q9H8V3 914 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 TCP11X1B4DZS4 312 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 H0Y626 953 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 EIF3DO15371 548 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ZSCAN9O15535 394 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 PPP2R3CQ969Q6 453 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ARHGEF26Q96DR7 871 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 A0A1B0GTH6 734 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 TDRD10Q5VZ19 366 aaKnown RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 RASGRP2Q7LDG7 609 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 MTIF3Q9H2K0 278 aaKnown RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 PXMP2Q9NR77 195 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 KCND2Q9NZV8 630 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 SENP1Q9P0U3 644 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ANO9A1A5B4 782 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ODC1P11926 461 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 HMOX2P30519 316 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 DHX34Q14147 1143 aaKnown RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 SNX17Q15036 470 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 YME1L1Q96TA2 773 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 CASTOR2A6NHX0 329 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 ENDOD1O94919 500 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 GPD1P21695 349 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 WEE1P30291 646 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 CELF4Q9BZC1 486 aaKnown RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-203ENST00000416123 TMEM131LA2VDJ0 1609 aa11.14□□□□□ -0.63
COL12A1-203ENST00000416123 MEFVO15553 781 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 COMTP21964 271 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 ATXN3P54252 364 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 PDCD2Q16342 344 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 SGO1Q5FBB7 561 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 DPF3Q92784 378 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 WDCPQ9H6R7 721 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 ARHGEF38Q9NXL2 777 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 MARCOQ9UEW3 520 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 SUPT3HB4E1H0 165 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 PHF2O75151 1096 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 SUPT3HO75486 399 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 MYO1DO94832 1006 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 ZRANB3Q5FWF4 1079 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 SUFUQ9UMX1 484 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 CHMP2BQ9UQN3 213 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 TEKT4Q8WW24 435 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 RTFDC1Q9BY42 306 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 GPR63Q9BZJ6 419 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 NPHS2Q9NP85 383 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 SYCE1LA8MT33 242 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 PLEKP08567 350 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 PCSK1P29120 753 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 KCNJ1P48048 391 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 AARSP49588 968 aaKnown RBP eCLIP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 PCMTD2Q9NV79 361 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 PKP3Q9Y446 797 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 FAM95CA0A1B0GW59 222 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 GMNCA6NCL1 334 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 RAB42Q8N4Z0 105 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 FAM161BQ96MY7 647 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 ZNF212Q9UDV6 495 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 MRPL42Q9Y6G3 142 aaKnown RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 KIAA0391O15091 583 aaKnown RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 MAFGO15525 162 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 C1orf131Q8NDD1 294 aaKnown RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 EXOC4Q96A65 974 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 RIT2Q99578 217 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 MTFR1LQ9H019 292 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 KCNF1Q9H3M0 494 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 CATSPERBQ9H7T0 1116 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 NEU2Q9Y3R4 380 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 FAM47DPA6NHR8 397 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 ADM5C9JUS6 153 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 AVPR1AP37288 418 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 MAP3K7CLP57077 242 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 GUCY1A3Q02108 690 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 MAP1SQ66K74 1059 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 SNX31Q8N9S9 440 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 FAM71DQ8N9W8 422 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 ZCCHC17Q9NP64 241 aaKnown RBP11.13□□□□□ -0.63
COL12A1-203ENST00000416123 LATS2Q9NRM7 1088 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
COL12A1-203ENST00000416123 SGPL1O95470 568 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms