RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 SNX21Q969T3 373 aa14.41□□□□□ -0.1
CTHRC1-202ENST00000415886 ACAP3Q96P50 834 aa14.41□□□□□ -0.1
CTHRC1-202ENST00000415886 TCHPQ9BT92 498 aa14.41□□□□□ -0.1
CTHRC1-202ENST00000415886 CCDC39Q9UFE4 941 aa14.41□□□□□ -0.1
CTHRC1-202ENST00000415886 YIPF1Q9Y548 306 aa14.41□□□□□ -0.1
CTHRC1-202ENST00000415886 A0A1W2PRU2 124 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 ABLIM1O14639 778 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 STX6O43752 255 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 VNN2O95498 520 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 OR4Q2P0C623 313 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 RPL9P32969 192 aaKnown RBP14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 KPNA1P52294 538 aaPredicted RBP14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 RAD51AP2Q09MP3 1159 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 STRN3Q13033 797 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 DHX8Q14562 1220 aaKnown RBP14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 HYIQ5T013 277 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 STXBP5Q5T5C0 1151 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 TXNDC11Q6PKC3 985 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 C1orf186Q6ZWK4 172 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 TMC8Q8IU68 726 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 YAF2Q8IY57 180 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 FAM160A2Q8N612 972 aaPredicted RBP14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 TTC8Q8TAM2 541 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 PNMA5Q96PV4 448 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 RUSC1Q9BVN2 902 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 LRRC3Q9BY71 257 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 MRPL4Q9BYD3 311 aaKnown RBP14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 KCND2Q9NZV8 630 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 TUBGCP4Q9UGJ1 667 aa14.4□□□□□ -0.1
CTHRC1-202ENST00000415886 SPTBN2O15020 2390 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 CHADO15335 359 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 PAPSS2O95340 614 aaPredicted RBP14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 MCF2P10911 925 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 PROZP22891 400 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 GUCY2CP25092 1073 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 MARCKSP29966 332 aaPredicted RBP14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 CNR2P34972 360 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 TXLNAP40222 546 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 MLLT6P55198 1093 aaPredicted RBP14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 FCHO2Q0JRZ9 810 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 SEZ6Q53EL9 994 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 CEP68Q76N32 757 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 KCNK18Q7Z418 384 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 DAW1Q8N136 415 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 APPL2Q8NEU8 664 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 BEST2Q8NFU1 509 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 E2F7Q96AV8 911 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 MSANTD3Q96H12 275 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 ZFYVE19Q96K21 471 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 ZBTB45Q96K62 511 aaPredicted RBP14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 PGLYRP2Q96PD5 576 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 DNAJC25Q9H1X3 360 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 CRISPLD1Q9H336 500 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 TMEM134Q9H6X4 195 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 C8orf33Q9H7E9 229 aaPredicted RBP14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 LARSQ9P2J5 1176 aaKnown RBP14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 ARHGAP28Q9P2N2 729 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 MAFFQ9ULX9 164 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 PCDHB8Q9UN66 801 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 TIMM13Q9Y5L4 95 aaPredicted RBP14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 CLIC4Q9Y696 253 aa14.39□□□□□ -0.11
CTHRC1-202ENST00000415886 MYBPHLA2RUH7 354 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 SPECC1L-ADORA2AF8WAN1 911 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 H0YCG3 227 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 PLS3P13797 630 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 CTHP32929 405 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 PON2Q15165 354 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 CCDC6Q16204 474 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 C1orf228Q6PIY5 440 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 MPZL3Q6UWV2 235 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 ZNF396Q96N95 335 aaPredicted RBP14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 LRRC3BQ96PB8 259 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 MKNK1Q9BUB5 465 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 GPR88Q9GZN0 384 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 ZHX3Q9H4I2 956 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 GTSE1Q9NYZ3 720 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 EPG5Q9HCE0 2579 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 F5P12259 2224 aa14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 TPRP12270 2363 aaKnown RBP14.38□□□□□ -0.11
CTHRC1-202ENST00000415886 CITO14578 2027 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 SLC16A4O15374 487 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 FAM13AO94988 1023 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 DDIT3P35638 169 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 MATR3P43243 847 aaKnown RBP eCLIP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 SLC12A3P55017 1021 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 YWHAHQ04917 246 aaPredicted RBP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 SPAG1Q07617 926 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 DUSP4Q13115 394 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 RESTQ13127 1097 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 MAPK7Q13164 816 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 KARSQ15046 597 aaKnown RBP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 SF3A2Q15428 464 aaKnown RBP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 SLC10A6Q3KNW5 377 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 AASDHQ4L235 1098 aaPredicted RBP14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 TMEM119Q4V9L6 283 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 DGKKQ5KSL6 1271 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 IL31Q6EBC2 164 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 FAM173BQ6P4H8 233 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 WDR5BQ86VZ2 330 aa14.37□□□□□ -0.11
CTHRC1-202ENST00000415886 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms