RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 PTPRZ1P23471 2315 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-204ENST00000415624 A0A1W2PQC6 194 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 SPTLC1O15269 473 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 B3GAT3O94766 335 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 TRIM21P19474 475 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 PBX1P40424 430 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 BRCC3P46736 316 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 MCCD1P59942 119 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 HTRA4P83105 476 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 RAPGEF1Q13905 1077 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 UPP1Q16831 310 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 TMEM173Q86WV6 379 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 VSTM4Q8IW00 320 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 DRC7Q8IY82 874 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 FIBCD1Q8N539 461 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 LRRC52Q8N7C0 313 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 COLGALT1Q8NBJ5 622 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 SPC24Q8NBT2 197 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 EHBP1Q8NDI1 1231 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 LMO3Q8TAP4 145 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 BCL7CQ8WUZ0 217 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 TATDN2Q93075 761 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 MRFAP1L1Q96HT8 127 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 ZNF558Q96NG5 402 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 PHOX2BQ99453 314 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 ARID3AQ99856 593 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 TMEM175Q9BSA9 504 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 NIF3L1Q9GZT8 377 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 CWH43Q9H720 699 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 NLRC4Q9NPP4 1024 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 MARCH5Q9NX47 278 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 APEX2Q9UBZ4 518 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 MSRAQ9UJ68 235 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 SNX9Q9Y5X1 595 aa11.75□□□□□ -0.53
TRAPPC12-204ENST00000415624 PIRO00625 290 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 NRP1O14786 923 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 PMM2O15305 246 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 CSPG5O95196 566 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 PNMA6AP0CW24 399 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 LAG3P18627 525 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 ATICP31939 592 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 RPL9P32969 192 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 CTNNB1P35222 781 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 PNPLA4P41247 253 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 POLR2FP61218 127 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 GOLGA8FQ08AF8 430 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 GOLGA8DPQ0D2H9 430 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 RAB30Q15771 203 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 ARHGAP44Q17R89 818 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 WDR72Q3MJ13 1102 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 IQCEQ6IPM2 695 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 DSTYKQ6XUX3 929 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 SPRED2Q7Z698 418 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 PHOSPHO2Q8TCD6 241 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 RSPH1Q8WYR4 309 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 DDX27Q96GQ7 796 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 MMS19Q96T76 1030 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 RAD9AQ99638 391 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 FAN1Q9Y2M0 1017 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 INSL6Q9Y581 213 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 ITIH6Q6UXX5 1313 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 TRIOO75962 3097 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 CACNA1BQ00975 2339 aa11.74□□□□□ -0.53
TRAPPC12-204ENST00000415624 RFXAPO00287 272 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 CA3P07451 260 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 GALTP07902 379 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 CD58P19256 250 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 CDC25BP30305 580 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 MYH10P35580 1976 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 ASPAP45381 313 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 CUL2Q13617 745 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 SGSM1Q2NKQ1 1148 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 KLHDC7AQ5VTJ3 777 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 SPECC1LQ69YQ0 1117 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 PHLDB3Q6NSJ2 640 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 KCNT2Q6UVM3 1135 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 CPLX3Q8WVH0 158 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 ANP32BQ92688 251 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 KREMEN1Q96MU8 473 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 COLEC11Q9BWP8 271 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 SDCBP2Q9H190 292 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 UBE2TQ9NPD8 197 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 DNAJC12Q9UKB3 198 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 ADAM28Q9UKQ2 775 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 MTUS1Q9ULD2 1270 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 COG5Q9UP83 839 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 MTCH2Q9Y6C9 303 aa11.73□□□□□ -0.53
TRAPPC12-204ENST00000415624 SF3B1O75533 1304 aaKnown RBP eCLIP11.72□□□□□ -0.534e-6■■■■■ 53.6
TRAPPC12-204ENST00000415624 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
TRAPPC12-204ENST00000415624 KPNA7A9QM74 516 aa11.72□□□□□ -0.53
TRAPPC12-204ENST00000415624 TMEM189-UBE2V1I3L0A0 370 aa11.72□□□□□ -0.53
TRAPPC12-204ENST00000415624 CYB561D2O14569 222 aa11.72□□□□□ -0.53
TRAPPC12-204ENST00000415624 HCRTO43612 131 aa11.72□□□□□ -0.53
TRAPPC12-204ENST00000415624 TADA2AO75478 443 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms