RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 FOSL1P15407 271 aa21.54■■□□□ 1.04
AP1S3-205ENST00000415298 ANKDD1AQ495B1 522 aa21.54■■□□□ 1.04
AP1S3-205ENST00000415298 SHC4Q6S5L8 630 aa21.54■■□□□ 1.04
AP1S3-205ENST00000415298 ALDH16A1Q8IZ83 802 aa21.54■■□□□ 1.04
AP1S3-205ENST00000415298 GOLM1Q8NBJ4 401 aa21.54■■□□□ 1.04
AP1S3-205ENST00000415298 INPP5DQ92835 1189 aa21.54■■□□□ 1.04
AP1S3-205ENST00000415298 PRMT1Q99873 361 aaKnown RBP21.54■■□□□ 1.04
AP1S3-205ENST00000415298 RNF146Q9NTX7 359 aa21.54■■□□□ 1.04
AP1S3-205ENST00000415298 ABCB11O95342 1321 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 SH3PXD2BA1X283 911 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 AOC2O75106 756 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 CCDC159P0C7I6 412 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 SLC39A14Q15043 492 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 PPP2R2DQ66LE6 453 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 NFRKBQ6P4R8 1299 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 HS2ST1Q7LGA3 356 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 VPS36Q86VN1 386 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 PLEKHO2Q8TD55 490 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 TBCKQ8TEA7 893 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 DENND2DQ9H6A0 471 aaPredicted RBP21.53■■□□□ 1.04
AP1S3-205ENST00000415298 EHD2Q9NZN4 543 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 RNF14Q9UBS8 474 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 ATP2A1O14983 1001 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 HSPA1AP0DMV8 641 aaKnown RBP21.53■■□□□ 1.04
AP1S3-205ENST00000415298 HSPA1BP0DMV9 641 aaKnown RBP21.53■■□□□ 1.04
AP1S3-205ENST00000415298 CFAP221Q4G0U5 840 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 ANKRD13CQ8N6S4 541 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 CCDC110Q8TBZ0 833 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 SPATC1LQ9H0A9 340 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 ISCUQ9H1K1 167 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 COL20A1Q9P218 1284 aa21.53■■□□□ 1.04
AP1S3-205ENST00000415298 LOC105371267A0A1B0GV96 52 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 CYLC1P35663 651 aaPredicted RBP21.52■■□□□ 1.04
AP1S3-205ENST00000415298 MXI1P50539 228 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 PFKPQ01813 784 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 GIT2Q14161 759 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 NR1D2Q14995 579 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 CYTH1Q15438 398 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 NDUFA5Q16718 116 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 DEFB115Q30KQ5 88 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 NSMFQ6X4W1 530 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 FAM47EQ6ZV65 393 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 SELENOSQ9BQE4 189 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 SELENONQ9NZV5 590 aa21.52■■□□□ 1.04
AP1S3-205ENST00000415298 MANSC4A6NHS7 340 aaPredicted RBP21.52■■□□□ 1.03
AP1S3-205ENST00000415298 TTLL13PA6NNM8 815 aa21.52■■□□□ 1.03
AP1S3-205ENST00000415298 OAZ1P54368 228 aa21.52■■□□□ 1.03
AP1S3-205ENST00000415298 UBXN2AP68543 259 aa21.52■■□□□ 1.03
AP1S3-205ENST00000415298 SLC34A1Q06495 639 aa21.52■■□□□ 1.03
AP1S3-205ENST00000415298 HLTFQ14527 1009 aaKnown RBP eCLIP21.52■■□□□ 1.03
AP1S3-205ENST00000415298 ZNF174Q15697 407 aa21.52■■□□□ 1.03
AP1S3-205ENST00000415298 PASD1Q8IV76 773 aa21.52■■□□□ 1.03
AP1S3-205ENST00000415298 UBLCP1Q8WVY7 318 aaPredicted RBP21.52■■□□□ 1.03
AP1S3-205ENST00000415298 CREBZFQ9NS37 354 aa21.52■■□□□ 1.03
AP1S3-205ENST00000415298 MARCKSP29966 332 aaPredicted RBP21.51■■□□□ 1.03
AP1S3-205ENST00000415298 WASHC5Q12768 1159 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 BOLA3Q53S33 107 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 DDX18Q9NVP1 670 aaKnown RBP21.51■■□□□ 1.03
AP1S3-205ENST00000415298 SNX9Q9Y5X1 595 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 CENPFP49454 3210 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 PARNO95453 639 aaKnown RBP21.51■■□□□ 1.03
AP1S3-205ENST00000415298 POLR2MP0CAP2 368 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 PTPN2P17706 415 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 NAA20P61599 178 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 CUL1Q13616 776 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 NONOQ15233 471 aaKnown RBP eCLIP21.51■■□□□ 1.03
AP1S3-205ENST00000415298 ZNF423Q2M1K9 1284 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 MYLK3Q32MK0 819 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 RILPL1Q5EBL4 403 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 VASH1Q7L8A9 365 aaPredicted RBP21.51■■□□□ 1.03
AP1S3-205ENST00000415298 ARHGAP24Q8N264 748 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 DCLK2Q8N568 766 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 HHIPL1Q96JK4 782 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 MAGEC2Q9UBF1 373 aaPredicted RBP21.51■■□□□ 1.03
AP1S3-205ENST00000415298 SATB2Q9UPW6 733 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 DUSP10Q9Y6W6 482 aa21.51■■□□□ 1.03
AP1S3-205ENST00000415298 S100A5P33763 92 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 KIF11P52732 1056 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 RPS6P62753 249 aaKnown RBP21.5■■□□□ 1.03
AP1S3-205ENST00000415298 TRADDQ15628 312 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 LETM2Q2VYF4 491 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 FAM117BQ6P1L5 589 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 SLC30A10Q6XR72 485 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 KRT25Q7Z3Z0 450 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 IFNL1Q8IU54 200 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 MB21D1Q8N884 522 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 DDHD1Q8NEL9 900 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 MARCH6O60337 910 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 CXCR5P32302 372 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 GPC3P51654 580 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 EPSTI1Q96J88 318 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 DNAJC7Q99615 494 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 ANO3Q9BYT9 981 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 ADAM7Q9H2U9 754 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 SLC45A1Q9Y2W3 748 aa21.5■■□□□ 1.03
AP1S3-205ENST00000415298 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.5■■□□□ 1.03
AP1S3-205ENST00000415298 A0A0G2JMZ2 1700 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 PIK3CDO00329 1044 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 PPP6R2O75170 966 aa21.49■■□□□ 1.03
AP1S3-205ENST00000415298 MCM7P33993 719 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms