RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 IGSF21Q96ID5 467 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 SENP8Q96LD8 212 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 PPP1R9BQ96SB3 815 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 DNAJC7Q99615 494 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 ARID3AQ99856 593 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 COLEC11Q9BWP8 271 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 VN1R3Q9BXE9 311 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 UBE2TQ9NPD8 197 aaPredicted RBP14.24□□□□□ -0.13
CNN3-203ENST00000415017 POLIQ9UNA4 740 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 LAMA3Q16787 3333 aa14.24□□□□□ -0.13
CNN3-203ENST00000415017 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.23□□□□□ -0.13
CNN3-203ENST00000415017 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.23□□□□□ -0.13
CNN3-203ENST00000415017 GRXCR1A8MXD5 290 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 F8VZ95 297 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 TLL1O43897 1013 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 P4HA1P13674 534 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 TRIM21P19474 475 aaKnown RBP14.23□□□□□ -0.13
CNN3-203ENST00000415017 TYMPP19971 482 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 FECHP22830 423 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 CASP14P31944 242 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 BRCC3P46736 316 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 ALDH7A1P49419 539 aaKnown RBP14.23□□□□□ -0.13
CNN3-203ENST00000415017 MFAP3P55082 362 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 POLR2FP61218 127 aaKnown RBP14.23□□□□□ -0.13
CNN3-203ENST00000415017 ZBED6P86452 979 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 PLCB3Q01970 1234 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 MLLT1Q03111 559 aaPredicted RBP14.23□□□□□ -0.13
CNN3-203ENST00000415017 LRMPQ12912 555 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 RRAGAQ7L523 313 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 GPR65Q8IYL9 337 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 FAM71AQ8IYT1 594 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 TDHQ8IZJ6 230 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 PPM1KQ8N3J5 372 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 TTC39CQ8N584 583 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 TC2NQ8N9U0 490 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 ZNF558Q96NG5 402 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 ZBED2Q9BTP6 218 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 GPR62Q9BZJ7 368 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 CHST7Q9NS84 486 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 AIPL1Q9NZN9 384 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 PCDHB8Q9UN66 801 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 L1RE1Q9UN81 338 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 NME7Q9Y5B8 376 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 SNX9Q9Y5X1 595 aa14.23□□□□□ -0.13
CNN3-203ENST00000415017 A0A1W2PPC1 479 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 FOXN3O00409 490 aaPredicted RBP14.22□□□□□ -0.13
CNN3-203ENST00000415017 SYN3O14994 580 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 TBC1D4O60343 1298 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 CILPO75339 1184 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 ARHGEF15O94989 841 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 OAZ2O95190 189 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 FGFR3P22607 806 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 WARSP23381 471 aaKnown RBP14.22□□□□□ -0.13
CNN3-203ENST00000415017 BMPR1AP36894 532 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 DRAP1Q14919 205 aaPredicted RBP14.22□□□□□ -0.13
CNN3-203ENST00000415017 IRF2BP2Q7Z5L9 587 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 TMEM86AQ8N2M4 240 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 PDCL2Q8N4E4 241 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 SMYD3Q9H7B4 428 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 CISHQ9NSE2 258 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 YBX2Q9Y2T7 364 aaKnown RBP14.22□□□□□ -0.13
CNN3-203ENST00000415017 PRG3Q9Y2Y8 225 aaPredicted RBP14.22□□□□□ -0.13
CNN3-203ENST00000415017 LUC7L2Q9Y383 392 aaKnown RBP14.22□□□□□ -0.13
CNN3-203ENST00000415017 R3HCC1Q9Y3T6 440 aaKnown RBP14.22□□□□□ -0.13
CNN3-203ENST00000415017 RWDD3Q9Y3V2 267 aa14.22□□□□□ -0.13
CNN3-203ENST00000415017 CYB561D2O14569 222 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 TRAPPC3O43617 180 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 MFAP3LO75121 409 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 CAPN15O75808 1086 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 WEE2P0C1S8 567 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 CLCN1P35523 988 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 PPM1AP35813 382 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 PBX3P40426 434 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 RABGGTBP53611 331 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 CDH8P55286 799 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 TNNC1P63316 161 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 ELAVL2Q12926 359 aaKnown RBP14.21□□□□□ -0.13
CNN3-203ENST00000415017 MEA1Q16626 185 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 E4F1Q66K89 784 aaPredicted RBP14.21□□□□□ -0.13
CNN3-203ENST00000415017 FUT10Q6P4F1 479 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 PDXDC1Q6P996 788 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 WDR59Q6PJI9 974 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 DDX53Q86TM3 631 aaKnown RBP14.21□□□□□ -0.13
CNN3-203ENST00000415017 UNC93AQ86WB7 457 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 OSTM1Q86WC4 334 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 DRC7Q8IY82 874 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 CRYBG2Q8N1P7 616 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 APPL2Q8NEU8 664 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 OLIG1Q8TAK6 271 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 RTP3Q9BQQ7 232 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 MRPL45Q9BRJ2 306 aaKnown RBP14.21□□□□□ -0.13
CNN3-203ENST00000415017 SYT11Q9BT88 431 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 NUCKS1Q9H1E3 243 aaKnown RBP14.21□□□□□ -0.13
CNN3-203ENST00000415017 NLRC4Q9NPP4 1024 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.13
CNN3-203ENST00000415017 AAASQ9NRG9 546 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 SPG21Q9NZD8 308 aa14.21□□□□□ -0.13
CNN3-203ENST00000415017 NXF1Q9UBU9 619 aaKnown RBP14.21□□□□□ -0.13
CNN3-203ENST00000415017 STK39Q9UEW8 545 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms