RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TRGV11A0A075B6L2 103 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 CCDC195A0A1B0GUA6 201 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 PPFIA2O75334 1257 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 IL33O95760 270 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 NUDT3O95989 172 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 SRGNP10124 158 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 TYRP1P17643 537 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 PRDX5P30044 214 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 RARRES1P49788 294 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 ANXA11P50995 505 aaKnown RBP4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 ZNF169Q14929 603 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 GEN1Q17RS7 908 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 CCDC93Q567U6 631 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 STRIP1Q5VSL9 837 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 TMPRSS9Q7Z410 1059 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 SLC17A8Q8NDX2 589 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 CAGE1Q8TC20 777 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 FAM167AQ96KS9 214 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 AIFM2Q9BRQ8 373 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 TLR10Q9BXR5 811 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 IMPG2Q9BZV3 1241 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 WDCPQ9H6R7 721 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 INTS13Q9NVM9 706 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 KCTD5Q9NXV2 234 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 DDX56Q9NY93 547 aaKnown RBP4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 CUX2O14529 1486 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 SPATA31A3Q5VYP0 1347 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 SALL3Q9BXA9 1300 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 WIZO95785 1651 aa4.67□□□□□ -1.66
HMGB3P23-201ENST00000414981 E2F8A0AVK6 867 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 PRSS29PA6NIE9 313 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 KIAA0355O15063 1070 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 ALDH1L1O75891 902 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 SUN1O94901 812 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 CHEK2O96017 543 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 GNAI3P08754 354 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 GATA3P23771 443 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 CXCR5P32302 372 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 FOLR3P41439 243 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 GNAI1P63096 354 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 HLXQ14774 488 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 PGS1Q32NB8 556 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 KIAA0895LQ68EN5 471 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 VWA1Q6PCB0 445 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 PRIMA1Q86XR5 153 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 FAM90A1Q86YD7 464 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 PDPRQ8NCN5 879 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 SIMC1Q8NDZ2 872 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 TMIEQ8NEW7 156 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 POC1BQ8TC44 478 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 LRIG1Q96JA1 1093 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 PDLIM2Q96JY6 352 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 NAP1L5Q96NT1 182 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 CRAMP1Q96RY5 1269 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 SIK2Q9H0K1 926 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 GPR35Q9HC97 309 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 KMT5AQ9NQR1 393 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 AASDHPPTQ9NRN7 309 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 ZDHHC8Q9ULC8 765 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 INSL6Q9Y581 213 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 PCDHA3Q9Y5H8 950 aa4.66□□□□□ -1.66
HMGB3P23-201ENST00000414981 CCDC88BA6NC98 1476 aa4.65□□□□□ -1.66
HMGB3P23-201ENST00000414981 PROM1O43490 865 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 ABLIM3O94929 683 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 GJB1P08034 283 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 PDGFRBP09619 1106 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 LPOP22079 712 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 CLK3P49761 638 aaKnown RBP4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 SETQ01105 290 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 TCF15Q12870 199 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 NOGQ13253 232 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 HABP2Q14520 560 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 KIF22Q14807 665 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 ATAT1Q5SQI0 421 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 MICALCLQ6ZW33 695 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 HEATR3Q7Z4Q2 680 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 ZNF575Q86XF7 245 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 SLC44A3Q8N4M1 653 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 STAG1Q8WVM7 1258 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 RGMAQ96B86 450 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 HOOK2Q96ED9 719 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 CAMKK2Q96RR4 588 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 TRIB1Q96RU8 372 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 SMOQ99835 787 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 MRPL46Q9H2W6 279 aaKnown RBP4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 FOXJ2Q9P0K8 574 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 LRIT1Q9P2V4 623 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 PNMA8BQ9ULN7 279 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 CDYLQ9Y232 598 aa4.65□□□□□ -1.67
HMGB3P23-201ENST00000414981 LRRC14BA6NHZ5 514 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 E9PLN8 166 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 MPPED1O15442 326 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 TPD52L2O43399 206 aaKnown RBP4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 PEX1O43933 1283 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 SOAT2O75908 522 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 FTLP02792 175 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 TYRP14679 529 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 PIK3CGP48736 1102 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 MAP2K6P52564 334 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms