RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HAS1Q92839 578 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 TRIM11Q96F44 468 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 DYDC2Q96IM9 177 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 RIT2Q99578 217 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 PLVAPQ9BX97 442 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 MRPL4Q9BYD3 311 aaKnown RBP5.45□□□□□ -1.54
VPS41-205ENST00000414632 MRPL18Q9H0U6 180 aaKnown RBP5.45□□□□□ -1.54
VPS41-205ENST00000414632 TMEM60Q9H2L4 133 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 KCNMB3Q9NPA1 279 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 WHRNQ9P202 907 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 PCOLCE2Q9UKZ9 415 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 GINS2Q9Y248 185 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 ACTL7BQ9Y614 415 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 MYH11P35749 1972 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 NRCAMQ92823 1304 aa5.45□□□□□ -1.54
VPS41-205ENST00000414632 A0A1W2PPC1 479 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 HBP1O60381 514 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 BAG4O95429 457 aaKnown RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 C22orf31O95567 290 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 CHRNA1P02708 482 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 VTNP04004 478 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 GHRP10912 638 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 MYOGP15173 224 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 GCFC2P16383 781 aaKnown RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 KLRC1P26715 233 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 SFNP31947 248 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 TECP42680 631 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 TOB1P50616 345 aaPredicted RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 CLCN3P51790 818 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 JAK3P52333 1124 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 SUMO1P63165 101 aaKnown RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 DEFB103AP81534 67 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 MRPS6P82932 125 aaKnown RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 PPP2R5CQ13362 524 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 CUL4AQ13619 759 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 CTTNQ14247 550 aaKnown RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 TMEM266Q2M3C6 531 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 ANKRD34AQ69YU3 496 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 MTHFD1LQ6UB35 978 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 B3GNT9Q6UX72 402 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 LRRTM3Q86VH5 581 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 METTL13Q8N6R0 699 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 ADCY4Q8NFM4 1077 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 DBF4BQ8NFT6 615 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 RIN3Q8TB24 985 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 WHAMMQ8TF30 809 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 RCC1LQ96I51 464 aaKnown RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 MRGPRX3Q96LB0 322 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 KREMEN1Q96MU8 473 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 FOXP1Q9H334 677 aaPredicted RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 TTC12Q9H892 705 aaPredicted RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 GP6Q9HCN6 339 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 RGL1Q9NZL6 768 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 WRAP73Q9P2S5 460 aaPredicted RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 NOL7Q9UMY1 257 aaKnown RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 MAPRE3Q9UPY8 281 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 AKT3Q9Y243 479 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 EMC9Q9Y3B6 208 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 KIF3AQ9Y496 699 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.44□□□□□ -1.54
VPS41-205ENST00000414632 PCDHB6Q9Y5E3 794 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 CDY2AQ9Y6F7 541 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 ATG2AQ2TAZ0 1938 aa5.44□□□□□ -1.54
VPS41-205ENST00000414632 COL1A2P08123 1366 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 FNDC1Q4ZHG4 1894 aaPredicted RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 MBLAC1A4D2B0 266 aaPredicted RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 RRN3P2A6NIE6 340 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 PP2D1A8MPX8 630 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 SHOXO15266 292 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 STBD1O95210 358 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 OR52Z1P0C646 297 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 ACTN1P12814 892 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 U2AF2P26368 475 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS41-205ENST00000414632 CD52P31358 61 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 RFC2P35250 354 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 KCNJ6P48051 423 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 SLC26A2P50443 739 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 NPEPPSP55786 919 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 WDR5P61964 334 aaKnown RBP5.43□□□□□ -1.54
VPS41-205ENST00000414632 RNF4P78317 190 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 SPIRE1Q08AE8 756 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 MGAT3Q09327 533 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 DRP2Q13474 957 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 LPIN1Q14693 890 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 KIZQ2M2Z5 673 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 LRIT3Q3SXY7 679 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 ZNF484Q5JVG2 852 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 CCDC181Q5TID7 509 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 LETMD1Q6P1Q0 360 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 FAM173BQ6P4H8 233 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 CNNM4Q6P4Q7 775 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 CNKSR3Q6P9H4 555 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 POMZP3Q6PJE2 187 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 LINC00114Q6XXX2 140 aa5.43□□□□□ -1.54
VPS41-205ENST00000414632 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS41-205ENST00000414632 ANO5Q75V66 913 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms