RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 HACD3Q9P035 362 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 ADGRB1O14514 1584 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 IGF2BP3O00425 579 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 ANP32DO95626 131 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 RALAP11233 206 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 ACADSP16219 412 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 IFNA8P32881 189 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 ERVK-24P63145 666 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 PRKCEQ02156 737 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 APPL2Q8NEU8 664 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 NSMCE4AQ9NXX6 385 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 PKD2L2Q9NZM6 624 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 KIF20BQ96Q89 1820 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 F5H423 210 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 COILP38432 576 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 NPEPPSP55786 919 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 TRIM16LQ309B1 348 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 HABP4Q5JVS0 413 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 AFG1LQ8WV93 481 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 PAPOLBQ9NRJ5 636 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 PAX7P23759 505 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 MAGEA4P43358 317 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 CLEC10AQ8IUN9 316 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 ELMOD1Q8N336 334 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 FBXL16Q8N461 479 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 GTF3C4Q9UKN8 822 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 HLA-DPA1P20036 260 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 BTKQ06187 659 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 TBCCQ15814 346 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 FRMD8P1Q9BZ68 369 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 SMARCAL1Q9NZC9 954 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 MTO1Q9Y2Z2 717 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 FAM107AO95990 144 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 ACADSBP45954 432 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 COL23A1Q86Y22 540 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 B4GALNT2Q8NHY0 566 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DBR1Q9UK59 544 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 C3orf70A6NLC5 250 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DFFAO00273 331 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 STX3Q13277 289 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 KDM7AQ6ZMT4 941 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 ZNF668Q96K58 619 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 NIF3L1Q9GZT8 377 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 COPG1Q9Y678 874 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 WDR47O94967 919 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 ERFP50548 548 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 ITGA8P53708 1063 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 PTGISQ16647 500 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 OR9Q1Q8NGQ5 310 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 TSPAN17Q96FV3 270 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 AGPAT3Q9NRZ7 376 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 JCADQ9P266 1359 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 A0A1B0GW55 424 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 PSTPIP1O43586 416 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 ENO1P06733 434 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DUX4L2P0CJ85 424 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DUX4L3P0CJ86 424 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DUX4L4P0CJ87 422 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DUX4L5P0CJ88 424 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DUX4L6P0CJ89 424 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DUX4L7P0CJ90 424 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 PLD3Q8IV08 490 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 FEZF2Q8TBJ5 459 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 GTF3C2Q8WUA4 911 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 RIN2Q8WYP3 895 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 GPRASP2Q96D09 838 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 NAF1Q96HR8 494 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 SERPINB12Q96P63 405 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DIABLOQ9NR28 239 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 RAB6BQ9NRW1 208 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 DUX4Q9UBX2 424 aa14.37□□□□□ -0.11
SMARCA4-202ENST00000413806 CD4P01730 458 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 DMPKQ09013 629 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 ZNF235Q14590 738 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 OR6P1Q8NGX9 317 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 CCT7Q99832 543 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 PRKAG2Q9UGJ0 569 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 BNIP3LO60238 219 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 HADHAP40939 763 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 PTK7Q13308 1070 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 TTC39BQ5VTQ0 682 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 PAPD7Q5XG87 772 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 STYK1Q6J9G0 422 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 ACAD10Q6JQN1 1059 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 ANGPTL8Q6UXH0 198 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 RINLQ6ZS11 566 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 DDX42Q86XP3 938 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 OR6J1Q8NGC5 347 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 OR2W6PQ8NHA6 318 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 CLMNQ96JQ2 1002 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 C9orf72Q96LT7 481 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 ZSWIM1Q9BR11 485 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 ABCF3Q9NUQ8 709 aa14.36□□□□□ -0.11
SMARCA4-202ENST00000413806 KBTBD4Q9NVX7 518 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms