RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CALUO43852 315 aaPredicted RBP10.86□□□□□ -0.67
TMEM248-202ENST00000413593 PRPF40AO75400 957 aaKnown RBP10.86□□□□□ -0.67
TMEM248-202ENST00000413593 TNNC2P02585 160 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 C8AP07357 584 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 KRT19P08727 400 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 HNRNPA1P09651 372 aaKnown RBP eCLIP10.86□□□□□ -0.67
TMEM248-202ENST00000413593 ATF2P15336 505 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 HOXA9P31269 272 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 ARPP19P56211 112 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 UBE2HP62256 183 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 RBP5P82980 135 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 NFIL3Q16649 462 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 DUOXA2Q1HG44 320 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 UVSSAQ2YD98 709 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 ZCWPW2Q504Y3 356 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 CSGALNACT2Q8N6G5 542 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 SLC7A14Q8TBB6 771 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 PLEKHO2Q8TD55 490 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 SMG7Q92540 1137 aaKnown RBP10.86□□□□□ -0.67
TMEM248-202ENST00000413593 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.673e-7■■□□□ 13.3
TMEM248-202ENST00000413593 SMARCE1Q969G3 411 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 FNBP1Q96RU3 617 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 OXCT2Q9BYC2 517 aaPredicted RBP10.86□□□□□ -0.67
TMEM248-202ENST00000413593 DSEQ9UL01 958 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 TRIP11Q15643 1979 aa10.86□□□□□ -0.67
TMEM248-202ENST00000413593 PDCD11Q14690 1871 aaKnown RBP10.85□□□□□ -0.67
TMEM248-202ENST00000413593 POU2F2P09086 479 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 OR4Q2P0C623 313 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 CPB1P15086 417 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 TNNI1P19237 187 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 SP100P23497 879 aaPredicted RBP10.85□□□□□ -0.67
TMEM248-202ENST00000413593 NR2F2P24468 414 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 CASP4P49662 377 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 BFSP1Q12934 665 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 COBLL1Q53SF7 1204 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 PPM1LQ5SGD2 360 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 ZNF658Q5TYW1 1059 aaPredicted RBP10.85□□□□□ -0.67
TMEM248-202ENST00000413593 WSCD1Q658N2 575 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 TPGS2Q68CL5 300 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 CLEC17AQ6ZS10 378 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 CCDC149Q6ZUS6 474 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 RTL10Q7L3V2 364 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 TRAPPC11Q7Z392 1133 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 METTL23Q86XA0 190 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 TCEAL8Q8IYN2 117 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 PARD3BQ8TEW8 1205 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 ZNF516Q92618 1163 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 IPO9Q96P70 1041 aaKnown RBP10.85□□□□□ -0.67
TMEM248-202ENST00000413593 RTP3Q9BQQ7 232 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 GTPBP4Q9BZE4 634 aaKnown RBP10.85□□□□□ -0.67
TMEM248-202ENST00000413593 WDR6Q9NNW5 1121 aaKnown RBP10.85□□□□□ -0.67
TMEM248-202ENST00000413593 GDAP2Q9NXN4 497 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 AFF4Q9UHB7 1163 aaKnown RBP10.85□□□□□ -0.67
TMEM248-202ENST00000413593 MAFFQ9ULX9 164 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 L1RE1Q9UN81 338 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 VWA8A3KMH1 1905 aa10.85□□□□□ -0.67
TMEM248-202ENST00000413593 TCF20Q9UGU0 1960 aaKnown RBP10.85□□□□□ -0.67
TMEM248-202ENST00000413593 LRRIQ3A6PVS8 624 aaPredicted RBP10.84□□□□□ -0.67
TMEM248-202ENST00000413593 C2CD4DB7Z1M9 353 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 PRRG1O14668 218 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 MAPK13O15264 365 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 CCL16O15467 120 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 SEC24AO95486 1093 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 VNN2O95498 520 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 RPL13P26373 211 aaKnown RBP10.84□□□□□ -0.67
TMEM248-202ENST00000413593 ELF1P32519 619 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 PRCPP42785 496 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 CLDN10P78369 228 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 ADCY1Q08828 1119 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 MYO1EQ12965 1108 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 GPR17Q13304 367 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 EDRF1Q3B7T1 1238 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 CEP135Q66GS9 1140 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 RNF19BQ6ZMZ0 732 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 RNF135Q8IUD6 432 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 ADSSL1Q8N142 457 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 OR10T2Q8NGX3 314 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 HPDLQ96IR7 371 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 TMEM209Q96SK2 561 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 PIDD1Q9HB75 910 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 CYP4F11Q9HBI6 524 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 MAN1B1Q9UKM7 699 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 FRMD4BQ9Y2L6 1034 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 R3HCC1Q9Y3T6 440 aaKnown RBP10.84□□□□□ -0.67
TMEM248-202ENST00000413593 NR2E1Q9Y466 385 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 INSL5Q9Y5Q6 135 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 SNX9Q9Y5X1 595 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 CLUHO75153 1309 aa10.84□□□□□ -0.67
TMEM248-202ENST00000413593 HUS1O60921 280 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 XYLBO75191 536 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 AKAP3O75969 853 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 CST3P01034 146 aaPredicted RBP10.83□□□□□ -0.68
TMEM248-202ENST00000413593 AP3M2P53677 418 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 DLG4P78352 724 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 ADAM9Q13443 819 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 C1orf220Q5T0J3 134 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 CENPPQ6IPU0 288 aa10.83□□□□□ -0.68
TMEM248-202ENST00000413593 OTOP3Q7RTS5 596 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms