RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ZBTB45Q96K62 511 aaPredicted RBP9.02□□□□□ -0.97
SYNE1-211ENST00000413186 PABPN1LA6NDY0 278 aaKnown RBP9.02□□□□□ -0.97
SYNE1-211ENST00000413186 EBAG9O00559 213 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 CDK17Q00537 523 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 ARID5BQ14865 1188 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 UROC1Q96N76 676 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 NUP85Q9BW27 656 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 CALN1Q9BXU9 219 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 ZNF148Q9UQR1 794 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 C2CD2Q9Y426 696 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 FAM169AQ9Y6X4 670 aa9.02□□□□□ -0.97
SYNE1-211ENST00000413186 LACTBL1A8MY62 500 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 SYF2O95926 243 aaKnown RBP9.01□□□□□ -0.97
SYNE1-211ENST00000413186 IFNB1P01574 187 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 GRM5P41594 1212 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 MYL6P60660 151 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 CCZ1BP86790 482 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 CCZ1P86791 482 aaPredicted RBP9.01□□□□□ -0.97
SYNE1-211ENST00000413186 ZNF280DQ6N043 979 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 LRRC31Q6UY01 552 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 OTUD6BQ8N6M0 293 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 ZNF296Q8WUU4 475 aaPredicted RBP9.01□□□□□ -0.97
SYNE1-211ENST00000413186 RUBCNQ92622 972 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 NTPCRQ9BSD7 190 aaKnown RBP9.01□□□□□ -0.97
SYNE1-211ENST00000413186 HIPK3Q9H422 1215 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 XAB2Q9HCS7 855 aaKnown RBP9.01□□□□□ -0.97
SYNE1-211ENST00000413186 INTUQ9ULD6 942 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 GIT1Q9Y2X7 761 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 UTRNP46939 3433 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.01□□□□□ -0.97
SYNE1-211ENST00000413186 H7C0C1 242 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 TREHO43280 583 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 CAND2O75155 1236 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 CSPG5O95196 566 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 ARIH2O95376 493 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 URODP06132 367 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 ATP5OP48047 213 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 GJA9P57773 515 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 BTG3Q14201 252 aaPredicted RBP9.01□□□□□ -0.97
SYNE1-211ENST00000413186 NAB2Q15742 525 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 CCDC25Q86WR0 208 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 APBB2Q92870 758 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 ZNF518BQ9C0D4 1074 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 DPP7Q9UHL4 492 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 SSX2IPQ9Y2D8 614 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 ASTN1O14525 1302 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 ANKRD31Q8N7Z5 1873 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 MYH8P13535 1937 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 TBKBP1A7MCY6 615 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 GOLGA8KD6RF30 607 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 KRT3P12035 628 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 CACNB2Q08289 660 aaPredicted RBP9.01□□□□□ -0.97
SYNE1-211ENST00000413186 ANKS4BQ8N8V4 417 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 FAM71BQ8TC56 605 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 TSC1Q92574 1164 aa9.01□□□□□ -0.97
SYNE1-211ENST00000413186 PRRG1O14668 218 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 MCF2LO15068 1137 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 ADAMTS3O15072 1205 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 FTCDO95954 541 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 APOEP02649 317 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 AKAP5P24588 427 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 SLC1A1P43005 524 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 RAP1GDS1P52306 607 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 TPD52P55327 224 aaPredicted RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 KCNA1Q09470 495 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 LRRC55Q6ZSA7 311 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 B4GALNT4Q76KP1 1039 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 ADGRF2Q8IZF7 708 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 POP1Q99575 1024 aaKnown RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 KCTD10Q9H3F6 313 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 DERAQ9Y315 318 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 CNTNAP2Q9UHC6 1331 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 DNAJC25-GNG10A0A024R161 153 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 ZNF189O75820 626 aaPredicted RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 CNMDO75829 334 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 ATG7O95352 703 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 C22orf31O95567 290 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 SRGAP2BP0DMP2 458 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 ARF4P18085 180 aaPredicted RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 KAZNQ674X7 775 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 PHLDB2Q86SQ0 1253 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 TTC13Q8NBP0 860 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 MAGOHBQ96A72 148 aaKnown RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 EMID1Q96A84 441 aaPredicted RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 PASKQ96RG2 1323 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 A0A0B4J269 797 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 RASSF10A6NK89 507 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 WBP4O75554 376 aaKnown RBP9□□□□□ -0.97
SYNE1-211ENST00000413186 F2P00734 622 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 CD52P31358 61 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 CDR2Q01850 454 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 SP2Q02086 613 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 FLOT2Q14254 428 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 PTPROQ16827 1216 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 CDO1Q16878 200 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 EFHC1Q5JVL4 640 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 RHOT1Q8IXI2 618 aa9□□□□□ -0.97
SYNE1-211ENST00000413186 ARHGAP18Q8N392 663 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms