RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 H7C4K7 107 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 CPB1P15086 417 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 RPL13P26373 211 aaKnown RBP12.89□□□□□ -0.35
NEDD1-202ENST00000411739 PSMC2P35998 433 aaKnown RBP12.89□□□□□ -0.35
NEDD1-202ENST00000411739 GCLMP48507 274 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 VAMP7P51809 220 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 CREMQ03060 361 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 PDXDC1Q6P996 788 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 RNF19BQ6ZMZ0 732 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 GPR65Q8IYL9 337 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 OR10T2Q8NGX3 314 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 SLC7A14Q8TBB6 771 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 ZNF560Q96MR9 790 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 TSG101Q99816 390 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 NUP62CLQ9H1M0 184 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 ADAM7Q9H2U9 754 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 L1RE1Q9UN81 338 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 POLIQ9UNA4 740 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 TTC28Q96AY4 2481 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 PSMA7O14818 248 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 CETN3O15182 167 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 LRRN2O75325 713 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 OAZ2O95190 189 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 SEC24AO95486 1093 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 C4BPAP04003 597 aaKnown RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 HOXB8P17481 243 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 ACAT1P24752 427 aaKnown RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 CCNE1P24864 410 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 SMAD2Q15796 467 aaKnown RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 CCDC142Q17RM4 750 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 PDCL2Q8N4E4 241 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 RPGRIP1Q96KN7 1286 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 UHRF1Q96T88 793 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 DZANK1Q9NVP4 752 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 FBXW11Q9UKB1 542 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 MUC3AQ02505 3323 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 CCL16O15467 120 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 VNN1O95497 513 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 C8AP07357 584 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 PPP3CAQ08209 521 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 ADCY1Q08828 1119 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 TRPC3Q13507 836 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 STIM1Q13586 685 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 MYBPC2Q14324 1141 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 EDRF1Q3B7T1 1238 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 CES5AQ6NT32 575 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 OSTM1Q86WC4 334 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 DHTKD1Q96HY7 919 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 MMS19Q96T76 1030 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 DUSP9Q99956 384 aaKnown RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 POMKQ9H5K3 350 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 SFXN1Q9H9B4 322 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 CYP4F11Q9HBI6 524 aa12.88□□□□□ -0.35
NEDD1-202ENST00000411739 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
NEDD1-202ENST00000411739 HUS1O60921 280 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 KRT13P13646 458 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 TYMPP19971 482 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 PNPLA4P41247 253 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 MYO1EQ12965 1108 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 CBX2Q14781 532 aaPredicted RBP12.87□□□□□ -0.35
NEDD1-202ENST00000411739 NFIL3Q16649 462 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 SOWAHAQ2M3V2 549 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 SV2AQ7L0J3 742 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 LRRTM3Q86VH5 581 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 LRRC52Q8N7C0 313 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 TMEM174Q8WUU8 243 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 SUSD6Q92537 303 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 ZNF707Q96C28 371 aaPredicted RBP12.87□□□□□ -0.35
NEDD1-202ENST00000411739 PI4K2AQ9BTU6 479 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 SLC27A5Q9Y2P5 690 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 SOAT2O75908 522 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 VNN2O95498 520 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 NTHL1P78549 312 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 FKBP3Q00688 224 aaKnown RBP12.87□□□□□ -0.35
NEDD1-202ENST00000411739 WDR72Q3MJ13 1102 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 LIN9Q5TKA1 542 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 SPOPLQ6IQ16 392 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 METTL23Q86XA0 190 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 ATAD1Q8NBU5 361 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 ST13P5Q8NFI4 369 aaPredicted RBP12.87□□□□□ -0.35
NEDD1-202ENST00000411739 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 SMG7Q92540 1137 aaKnown RBP12.87□□□□□ -0.35
NEDD1-202ENST00000411739 CRISPLD1Q9H336 500 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 PIDD1Q9HB75 910 aa12.87□□□□□ -0.35
NEDD1-202ENST00000411739 DOCK6Q96HP0 2047 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 PRRG1O14668 218 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 ZMYND10O75800 440 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 ABLIM3O94929 683 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 CYP11A1P05108 521 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 EPB41P11171 864 aaKnown RBP12.86□□□□□ -0.35
NEDD1-202ENST00000411739 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms