RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 PIK3CAP42336 1068 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 SLC11A1P49279 550 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 TAF6P49848 677 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 MYL6P60660 151 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 PLCB3Q01970 1234 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 UBXN1Q04323 297 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 WDR44Q5JSH3 913 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 PRPF38BQ5VTL8 546 aaKnown RBP9.42□□□□□ -0.9
LINC02539-201ENST00000411615 KCNT2Q6UVM3 1135 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 CD300LGQ6UXG3 332 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 ENOSF1Q7L5Y1 443 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 LIMS2Q7Z4I7 341 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 SLC39A11Q8N1S5 342 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 TTC39CQ8N584 583 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 COLGALT1Q8NBJ5 622 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 SEMA4DQ92854 862 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 IQCDQ96DY2 449 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 HPDLQ96IR7 371 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 SUSD3Q96L08 255 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 GOLGA2P5Q9HBQ8 144 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 SPG21Q9NZD8 308 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 IFNKQ9P0W0 207 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 DNAJB4Q9UDY4 337 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 FBXL5Q9UKA1 691 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 ADAM28Q9UKQ2 775 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 SCN1AP35498 2009 aa9.42□□□□□ -0.9
LINC02539-201ENST00000411615 NLRC5Q86WI3 1866 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 SF3B1O75533 1304 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 KIAA1671Q9BY89 1806 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 LINC01553A4QN01 128 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 GOLGA6L3A6NEY3 463 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 GRXCR1A8MXD5 290 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 M0QZQ0 153 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 PES1O00541 588 aaKnown RBP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 TADA2AO75478 443 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 KRT19P08727 400 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 RFX1P22670 979 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 TBXAS1P24557 533 aaPredicted RBP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 PBX1P40424 430 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 OR1G1P47890 313 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 GUCY2FP51841 1108 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 RABGGTBP53611 331 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 ERVK-21P61565 698 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 GCNT1Q02742 428 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 UBE3AQ05086 875 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 FIGNQ5HY92 759 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 ZNF667Q5HYK9 610 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 SPOUT1Q5T280 376 aaKnown RBP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 FAM109BQ6ICB4 259 aaPredicted RBP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 TRIM65Q6PJ69 517 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 TOP6BLQ8N6T0 577 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 MRFAP1L1Q96HT8 127 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 IGSF21Q96ID5 467 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 TGS1Q96RS0 853 aaKnown RBP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 PAAF1Q9BRP4 392 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 NUP58Q9BVL2 599 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 PBX4Q9BYU1 374 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 EDEM3Q9BZQ6 932 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 XPO4Q9C0E2 1151 aaKnown RBP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 INTS2Q9H0H0 1204 aaKnown RBP9.41□□□□□ -0.9
LINC02539-201ENST00000411615 MMRN2Q9H8L6 949 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 CYP3A43Q9HB55 503 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 MARCH5Q9NX47 278 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 GCNT4Q9P109 453 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 DSEQ9UL01 958 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 LZTS1Q9Y250 596 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 SIK3Q9Y2K2 1263 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 NUB1Q9Y5A7 615 aa9.41□□□□□ -0.9
LINC02539-201ENST00000411615 ITIH6Q6UXX5 1313 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TMEM265A0A087WTH1 108 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 LCHNA4D1U4 455 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
LINC02539-201ENST00000411615 PPEF2O14830 753 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 SYN3O14994 580 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TEX33O43247 280 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TACC1O75410 805 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 KIF4AO95239 1232 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 CYP11A1P05108 521 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 CA3P07451 260 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 SLC9A1P19634 815 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TYMPP19971 482 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 MRE11P49959 708 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 NOP14P78316 857 aaKnown RBP9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TAP1Q03518 808 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 KRT17Q04695 432 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 SYCP1Q15431 976 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 ZNF699Q32M78 642 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 WDR72Q3MJ13 1102 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TIGD5Q53EQ6 642 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 DPY19L2P1Q6NXN4 242 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 DDX53Q86TM3 631 aaKnown RBP9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TMEM86AQ8N2M4 240 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 C3orf58Q8NDZ4 430 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 APPL2Q8NEU8 664 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 TMEM169Q96HH4 297 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 NT5C1BQ96P26 610 aa9.4□□□□□ -0.9
LINC02539-201ENST00000411615 OXCT2Q9BYC2 517 aaPredicted RBP9.4□□□□□ -0.9
LINC02539-201ENST00000411615 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms