RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 SCN10AQ9Y5Y9 1956 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 PDE4DIPQ5VU43 2346 aa20.56■□□□□ 0.88
LMO2-203ENST00000411482 CCDC66A2RUB6 948 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 HAS3O00219 553 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 TSPAN1O60635 241 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 CALCAP01258 141 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 VTNP04004 478 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 TMEM191BP0C7N4 346 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 CTNNA1P35221 906 aaKnown RBP20.55■□□□□ 0.88
LMO2-203ENST00000411482 TFAMQ00059 246 aaKnown RBP20.55■□□□□ 0.88
LMO2-203ENST00000411482 SLC7A5Q01650 507 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 PTP4A2Q12974 167 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 NNTQ13423 1086 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 TRPC3Q13507 836 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 SMC1AQ14683 1233 aaKnown RBP20.55■□□□□ 0.88
LMO2-203ENST00000411482 EMBQ6PCB8 327 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 PCSK9Q8NBP7 692 aaKnown RBP20.55■□□□□ 0.88
LMO2-203ENST00000411482 ZNF606Q8WXB4 792 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 CAVIN3Q969G5 261 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 CYFIP2Q96F07 1278 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 SENP6Q9GZR1 1112 aaPredicted RBP20.55■□□□□ 0.88
LMO2-203ENST00000411482 FAM124BQ9H5Z6 455 aaPredicted RBP20.55■□□□□ 0.88
LMO2-203ENST00000411482 C11orf49Q9H6J7 331 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 SIX4Q9UIU6 781 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 PCDHA3Q9Y5H8 950 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 NRCAMQ92823 1304 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 KAT6AQ92794 2004 aa20.55■□□□□ 0.88
LMO2-203ENST00000411482 MOXD2PA6NHM9 499 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 LACTBL1A8MY62 500 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 KRIT1O00522 736 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 LSM8O95777 96 aaKnown RBP20.54■□□□□ 0.88
LMO2-203ENST00000411482 CXCL8P10145 99 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 ASPAP45381 313 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 NSFP46459 744 aaKnown RBP20.54■□□□□ 0.88
LMO2-203ENST00000411482 EPHB4P54760 987 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 RNASE9P60153 205 aaKnown RBP20.54■□□□□ 0.88
LMO2-203ENST00000411482 YWHAEP62258 255 aaKnown RBP20.54■□□□□ 0.88
LMO2-203ENST00000411482 ADAM17P78536 824 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 C1QBPQ07021 282 aaKnown RBP20.54■□□□□ 0.88
LMO2-203ENST00000411482 MESDQ14696 234 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 NT5DC4Q86YG4 428 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 TMEM192Q8IY95 271 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 RNPC3Q96LT9 517 aaKnown RBP20.54■□□□□ 0.88
LMO2-203ENST00000411482 BCO2Q9BYV7 579 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 CISHQ9NSE2 258 aa20.54■□□□□ 0.88
LMO2-203ENST00000411482 SMIM35A0A1B0GVV1 85 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 A0A1W2PQ45 241 aaPredicted RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 A0A1W2PQY0 241 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 SART1O43290 800 aaKnown RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 ATMINO43313 823 aaPredicted RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 RAD51CO43502 376 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 HEXIM1O94992 359 aaKnown RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 FGGP02679 453 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 ATICP31939 592 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 CDH5P33151 784 aaPredicted RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 AARSP49588 968 aaKnown RBP eCLIP20.53■□□□□ 0.88
LMO2-203ENST00000411482 PURAQ00577 322 aaKnown RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 GABPB1Q06547 395 aaPredicted RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 PTPROQ16827 1216 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 SLC10A6Q3KNW5 377 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 NAA35Q5VZE5 725 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 PLEKHA7Q6IQ23 1121 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 CXCL17Q6UXB2 119 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 CD302Q8IX05 232 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 SEC14L1Q92503 715 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 FAM212AQ96EL1 285 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 ZNF518BQ9C0D4 1074 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 PCDHGC3Q9UN70 934 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 GRIN2DO15399 1336 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 STAU1O95793 577 aaKnown RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 CFHP08603 1231 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 RRM1P23921 792 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 SLC1A1P43005 524 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 CPT1AP50416 773 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 TMEM132AQ24JP5 1023 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 ZNF699Q32M78 642 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 CDR2LQ86X02 465 aaPredicted RBP20.53■□□□□ 0.88
LMO2-203ENST00000411482 C1orf127Q8N9H9 656 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 NLRP7Q8WX94 980 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 CPA5Q8WXQ8 436 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 KRT35Q92764 455 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 SETD4Q9NVD3 440 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 C2CD2Q9Y426 696 aa20.53■□□□□ 0.88
LMO2-203ENST00000411482 MROH7Q68CQ1 1323 aa20.52■□□□□ 0.88
LMO2-203ENST00000411482 GPR32O75388 356 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 SMIM10L2AP0DMW4 78 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 SMIM10L2BP0DMW5 78 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 ITGA4P13612 1032 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 GRM5P41594 1212 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 OSTNP61366 133 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 FAM193AP78312 1265 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 SNX17Q15036 470 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 LIN9Q5TKA1 542 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 SLC39A5Q6ZMH5 540 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 AP1M1Q9BXS5 423 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 ACBD3Q9H3P7 528 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.52■□□□□ 0.87
LMO2-203ENST00000411482 CHORDC1Q9UHD1 332 aaPredicted RBP20.52■□□□□ 0.87
LMO2-203ENST00000411482 HPCAL4Q9UM19 191 aa20.52■□□□□ 0.87
LMO2-203ENST00000411482 THAP12O43422 761 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms