RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 H3BRB1 525 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 MYO1DO94832 1006 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 NCAM1P13591 858 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 BRD2P25440 801 aaKnown RBP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 PGM5Q15124 567 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 HSP90AA5PQ58FG0 334 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 E4F1Q66K89 784 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 TRMT10CQ7L0Y3 403 aaKnown RBP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 CBWD2Q8IUF1 395 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 SEPT8Q92599 483 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 BTBD6Q96KE9 485 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 CGRRF1Q99675 332 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 MUC3BQ9H195 1237 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 TUT1Q9H6E5 874 aaKnown RBP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 ANGPTL2Q9UKU9 493 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 HPSEQ9Y251 543 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 TOB1P50616 345 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 KIZQ2M2Z5 673 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 KIRREL3Q8IZU9 778 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 ATP6V1G3Q96LB4 118 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 AGAP3Q96P47 875 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 TSSK1BQ9BXA7 367 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 VTA1Q9NP79 307 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 L3MBTL1Q9Y468 752 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 SLC30A1Q9Y6M5 507 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 VDRP11473 427 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 GTF2H3Q13889 308 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 TBCCQ15814 346 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 C10orf120Q5SQS8 335 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 TRIM65Q6PJ69 517 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 RAD9BQ6WBX8 426 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 SCFD1Q8WVM8 642 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 TSPAN17Q96FV3 270 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 CENPKQ9BS16 269 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 SLC13A1Q9BZW2 595 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 KLK14Q9P0G3 267 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 PLAGL2Q9UPG8 496 aa9.53□□□□□ -0.88
PBRM1-208ENST00000410007 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
PBRM1-208ENST00000410007 SPAG6O75602 509 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 LRG1P02750 347 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 CENPCQ03188 943 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 PKN1Q16512 942 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 HABP4Q5JVS0 413 aaKnown RBP9.52□□□□□ -0.88
PBRM1-208ENST00000410007 THEMIS2Q5TEJ8 643 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 ACAD10Q6JQN1 1059 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 HIBCHQ6NVY1 386 aaPredicted RBP9.52□□□□□ -0.88
PBRM1-208ENST00000410007 ZNF720Q7Z2F6 126 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 SPATA18Q8TC71 538 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 RBM15Q96T37 977 aaKnown RBP eCLIP9.52□□□□□ -0.88
PBRM1-208ENST00000410007 STARD7Q9NQZ5 370 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 IL17RBQ9NRM6 502 aa9.52□□□□□ -0.88
PBRM1-208ENST00000410007 ABI2Q9NYB9 513 aaPredicted RBP9.52□□□□□ -0.88
PBRM1-208ENST00000410007 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.52□□□□□ -0.88
PBRM1-208ENST00000410007 MAP2P11137 1827 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 KIF20BQ96Q89 1820 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 MROH2AA6NES4 1674 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 MAPTP10636 758 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 RBP3P10745 1247 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 DDX5P17844 614 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 SERPINB9P50453 376 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 GLRA4Q5JXX5 417 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 ATP6V0D2Q8N8Y2 350 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 LRRC1Q9BTT6 524 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 ABHD16BQ9H3Z7 469 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 OLFML3Q9NRN5 406 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 METTL5Q9NRN9 209 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 AIPL1Q9NZN9 384 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 ZC3H7BQ9UGR2 993 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 DSEQ9UL01 958 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 CST8O60676 142 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 ANP32DO95626 131 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 ARFIP2P53365 341 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 CDR2Q01850 454 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 RNF135Q8IUD6 432 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 C1orf131Q8NDD1 294 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 SOCS4Q8WXH5 440 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 FRMD8Q9BZ67 464 aaPredicted RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 IRX2Q9BZI1 471 aaPredicted RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 MTMR12Q9C0I1 747 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 DDX4Q9NQI0 724 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 GYG2O15488 501 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 CDH16O75309 829 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 HAUS5O94927 633 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 F9P00740 461 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 VIL1P09327 827 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 HADHAP40939 763 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 ARHGEF7Q14155 803 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 LBRQ14739 615 aaKnown RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 CALML6Q8TD86 181 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 USP33Q8TEY7 942 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 GRAMD1AQ96CP6 724 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 CBWD1Q9BRT8 395 aa9.52□□□□□ -0.89
PBRM1-208ENST00000410007 GLIS2Q9BZE0 524 aaPredicted RBP9.52□□□□□ -0.89
PBRM1-208ENST00000410007 ZNF518BQ9C0D4 1074 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms