RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TRIM49CP0CI26 452 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 EPB41P11171 864 aaKnown RBP24.07■■□□□ 1.44
PTCD3-203ENST00000409783 KCNQ1P51787 676 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 NLRP12P59046 1061 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 MRPS5P82675 430 aaKnown RBP24.07■■□□□ 1.44
PTCD3-203ENST00000409783 YWHAHQ04917 246 aaPredicted RBP24.07■■□□□ 1.44
PTCD3-203ENST00000409783 PPP3CAQ08209 521 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 CLUL1Q15846 466 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 DPCR1Q3MIW9 517 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 CTXN3Q4LDR2 81 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 ZNF280DQ6N043 979 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 SMRP1Q8NCR6 262 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 HPDLQ96IR7 371 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 CEP63Q96MT8 703 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 ASB2Q96Q27 587 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 XYLT2Q9H1B5 865 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 CD207Q9UJ71 328 aa24.07■■□□□ 1.44
PTCD3-203ENST00000409783 STAU1O95793 577 aaKnown RBP24.06■■□□□ 1.44
PTCD3-203ENST00000409783 SPATA31D3P0C874 917 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 SRGAP2BP0DMP2 458 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 KRT13P13646 458 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 HOXB8P17481 243 aaPredicted RBP24.06■■□□□ 1.44
PTCD3-203ENST00000409783 ROR1Q01973 937 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 WSCD1Q658N2 575 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 OVOS1Q6IE37 1185 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 SPATA31D4Q6ZUB0 917 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 SV2AQ7L0J3 742 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 FILIP1Q7Z7B0 1213 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 FEZF2Q8TBJ5 459 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 RTP3Q9BQQ7 232 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 MAN1C1Q9NR34 630 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 DZANK1Q9NVP4 752 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 TMEM63CQ9P1W3 806 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 RWDD2AQ9UIY3 292 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 FBXW11Q9UKB1 542 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 L1RE1Q9UN81 338 aa24.06■■□□□ 1.44
PTCD3-203ENST00000409783 ARHGEF37A1IGU5 675 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 GRXCR2A6NFK2 248 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 ABLIM3O94929 683 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 PAPLNO95428 1278 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 MYL6P60660 151 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 MYO1EQ12965 1108 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 AAK1Q2M2I8 961 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 USP37Q86T82 979 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 C12orf76Q8N812 135 aaPredicted RBP24.05■■□□□ 1.44
PTCD3-203ENST00000409783 HDAC7Q8WUI4 952 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 DSEQ9UL01 958 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 SNX9Q9Y5X1 595 aa24.05■■□□□ 1.44
PTCD3-203ENST00000409783 TCF20Q9UGU0 1960 aaKnown RBP24.04■■□□□ 1.44
PTCD3-203ENST00000409783 WDR27A2RRH5 827 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 MBTPS2O43462 519 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 BMP1P13497 986 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 GCLMP48507 274 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 SMAD4Q13485 552 aaKnown RBP24.04■■□□□ 1.44
PTCD3-203ENST00000409783 BIRC3Q13489 604 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 SOWAHAQ2M3V2 549 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 PDCL2Q8N4E4 241 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 KREMEN2Q8NCW0 462 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 OXCT2Q9BYC2 517 aaPredicted RBP24.04■■□□□ 1.44
PTCD3-203ENST00000409783 PLEKHA4Q9H4M7 779 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 VRTNQ9H8Y1 702 aa24.04■■□□□ 1.44
PTCD3-203ENST00000409783 C2orf16Q68DN1 1984 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 ATICP31939 592 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 TRPC3Q13507 836 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 NCOA4Q13772 614 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 CCDC183Q5T5S1 534 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 PTCRAQ6ISU1 281 aaPredicted RBP24.03■■□□□ 1.44
PTCD3-203ENST00000409783 TOP6BLQ8N6T0 577 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 OR10T2Q8NGX3 314 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 ZNF461Q8TAF7 563 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 SUSD6Q92537 303 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 TMEM209Q96SK2 561 aa24.03■■□□□ 1.44
PTCD3-203ENST00000409783 R3HCC1Q9Y3T6 440 aaKnown RBP24.03■■□□□ 1.44
PTCD3-203ENST00000409783 OR6C75A6NL08 312 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 HUS1O60921 280 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 PHACTR2O75167 634 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 GTF2H1P32780 548 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 PUS10Q3MIT2 529 aaKnown RBP24.02■■□□□ 1.44
PTCD3-203ENST00000409783 DPH6Q7L8W6 267 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 FRMD5Q7Z6J6 570 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 OSTM1Q86WC4 334 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 SLC35C1Q96A29 364 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 APOL5Q9BWW9 433 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 SRRTQ9BXP5 876 aaKnown RBP24.02■■□□□ 1.44
PTCD3-203ENST00000409783 SFXN1Q9H9B4 322 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 TMEM8AQ9HCN3 771 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 ARMCX3Q9UH62 379 aaPredicted RBP24.02■■□□□ 1.44
PTCD3-203ENST00000409783 CDH22Q9UJ99 828 aa24.02■■□□□ 1.44
PTCD3-203ENST00000409783 GABRDO14764 452 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 RFPL2O75678 378 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 VNN2O95498 520 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 HLA-DRAP01903 254 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 OR4Q2P0C623 313 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 IL9P15248 144 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 ARPP19P56211 112 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 RARS2Q5T160 578 aaKnown RBP24.01■■□□□ 1.43
PTCD3-203ENST00000409783 METTL23Q86XA0 190 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 TMEM86AQ8N2M4 240 aa24.01■■□□□ 1.43
PTCD3-203ENST00000409783 CMASQ8NFW8 434 aaPredicted RBP24.01■■□□□ 1.43
PTCD3-203ENST00000409783 SPATA18Q8TC71 538 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms