RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TRPV6Q9H1D0 765 aa15.04■□□□□ -0
LIMS2-206ENST00000409754 EPC1Q9H2F5 836 aa15.04■□□□□ -0
LIMS2-206ENST00000409754 VRTNQ9H8Y1 702 aa15.04■□□□□ -0
LIMS2-206ENST00000409754 ANKZF1Q9H8Y5 726 aa15.04■□□□□ -0
LIMS2-206ENST00000409754 UVRAGQ9P2Y5 699 aa15.04■□□□□ -0
LIMS2-206ENST00000409754 PACSIN2Q9UNF0 486 aaPredicted RBP15.04■□□□□ -0
LIMS2-206ENST00000409754 TANC1Q9C0D5 1861 aa15.04■□□□□ -0
LIMS2-206ENST00000409754 CALCAP01258 141 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 CD4P01730 458 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 TUBBP07437 444 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 MYBL1P10243 752 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 CRYBB1P53674 252 aaPredicted RBP15.03■□□□□ -0
LIMS2-206ENST00000409754 ZNF667Q5HYK9 610 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 GDF6Q6KF10 455 aaPredicted RBP15.03■□□□□ -0
LIMS2-206ENST00000409754 MMGT1Q8N4V1 131 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 ZNF653Q96CK0 615 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 TRIM11Q96F44 468 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 PDCL3Q9H2J4 239 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 GOLPH3Q9H4A6 298 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 CISHQ9NSE2 258 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 TRMT13Q9NUP7 481 aaKnown RBP15.03■□□□□ -0
LIMS2-206ENST00000409754 ITGA11Q9UKX5 1188 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 DERAQ9Y315 318 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 LAMA3Q16787 3333 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 PQBP1O60828 265 aaKnown RBP15.03■□□□□ -0
LIMS2-206ENST00000409754 STAU1O95793 577 aaKnown RBP15.03■□□□□ -0
LIMS2-206ENST00000409754 KRT19P08727 400 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 ITGB8P26012 769 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 CENPCQ03188 943 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 FAAP100Q0VG06 881 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 SESTD1Q86VW0 696 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 SPATA4Q8NEY3 305 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 BCO2Q9BYV7 579 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 AVENQ9NQS1 362 aaPredicted RBP15.03■□□□□ -0
LIMS2-206ENST00000409754 RAB21Q9UL25 225 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 ATP11BQ9Y2G3 1177 aa15.03■□□□□ -0
LIMS2-206ENST00000409754 KCNK3O14649 394 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 THAP12O43422 761 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 ITGB3P05106 788 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 NSFP46459 744 aaKnown RBP15.02□□□□□ -0.01
LIMS2-206ENST00000409754 DNA2P51530 1060 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 CLCN6P51797 869 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 BRD3Q15059 726 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 MCOLN2Q8IZK6 566 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 TMEM40Q8WWA1 233 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 ZNF606Q8WXB4 792 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 SNX27Q96L92 541 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 SELENOOQ9BVL4 669 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 NUP85Q9BW27 656 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 EIF2AQ9BY44 585 aaKnown RBP15.02□□□□□ -0.01
LIMS2-206ENST00000409754 CNOT8Q9UFF9 292 aaKnown RBP15.02□□□□□ -0.01
LIMS2-206ENST00000409754 GTF2IRD1Q9UHL9 959 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 TBX21Q9UL17 535 aa15.02□□□□□ -0.01
LIMS2-206ENST00000409754 SCN5AQ14524 2016 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 FAM170AA1A519 330 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 TARSL2A2RTX5 802 aaKnown RBP15.01□□□□□ -0.01
LIMS2-206ENST00000409754 TRIM43BA6NCK2 446 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 RHOXF2BP0C7M4 288 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 P4HA1P13674 534 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 CD58P19256 250 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 YARSP54577 528 aaKnown RBP15.01□□□□□ -0.01
LIMS2-206ENST00000409754 NOMO3P69849 1222 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 RBP5P82980 135 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 C2orf54Q08AI8 447 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 NAA35Q5VZE5 725 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 C7orf61Q8IZ16 206 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 ZNF564Q8TBZ8 553 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-206ENST00000409754 ACTRT1Q8TDG2 376 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 TRIM43Q96BQ3 446 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-206ENST00000409754 CYFIP2Q96F07 1278 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 KIF12Q96FN5 646 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 MS4A14Q96JA4 679 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 VCPIP1Q96JH7 1222 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 RPS6KC1Q96S38 1066 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 RHOXF2Q9BQY4 288 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 FAM124BQ9H5Z6 455 aaPredicted RBP15.01□□□□□ -0.01
LIMS2-206ENST00000409754 CYP3A43Q9HB55 503 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 DPP3Q9NY33 737 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 SNTG2Q9NY99 539 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 NXF1Q9UBU9 619 aaKnown RBP15.01□□□□□ -0.01
LIMS2-206ENST00000409754 POLIQ9UNA4 740 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 ALG6Q9Y672 507 aa15.01□□□□□ -0.01
LIMS2-206ENST00000409754 RALGAPA2Q2PPJ7 1873 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 DDX3YO15523 660 aaKnown RBP15□□□□□ -0.01
LIMS2-206ENST00000409754 ATMINO43313 823 aaPredicted RBP15□□□□□ -0.01
LIMS2-206ENST00000409754 LSM8O95777 96 aaKnown RBP15□□□□□ -0.01
LIMS2-206ENST00000409754 RPLP2P05387 115 aaKnown RBP15□□□□□ -0.01
LIMS2-206ENST00000409754 WEE2P0C1S8 567 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 POLR2BP30876 1174 aaKnown RBP15□□□□□ -0.01
LIMS2-206ENST00000409754 WDR72Q3MJ13 1102 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 SCARA5Q6ZMJ2 495 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 MON1BQ7L1V2 547 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 PHF13Q86YI8 300 aaPredicted RBP15□□□□□ -0.01
LIMS2-206ENST00000409754 CPA5Q8WXQ8 436 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 TOX2Q96NM4 488 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 PNKPQ96T60 521 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 CELF4Q9BZC1 486 aaKnown RBP15□□□□□ -0.01
LIMS2-206ENST00000409754 SMARCAL1Q9NZC9 954 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 EHD2Q9NZN4 543 aa15□□□□□ -0.01
LIMS2-206ENST00000409754 AGAP1Q9UPQ3 857 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms