RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 BICDL2A1A5D9 508 aa21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 CYP11A1P05108 521 aa21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 KRT13P13646 458 aa21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 VAMP7P51809 220 aa21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 DLG4P78352 724 aa21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 SMAD4Q13485 552 aaKnown RBP21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 PTCRAQ6ISU1 281 aaPredicted RBP21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 S1PR5Q9H228 398 aa21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 MAN1C1Q9NR34 630 aa21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 GDAP2Q9NXN4 497 aa21.37■■□□□ 1.01
PDLIM2-207ENST00000409417 SLC16A3O15427 465 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 SPATA31D3P0C874 917 aa21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 EPB41P11171 864 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 BMP1P13497 986 aa21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 BFSP1Q12934 665 aa21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 TJAP1Q5JTD0 557 aa21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 OVOS1Q6IE37 1185 aa21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 TTI2Q6NXR4 508 aa21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 SPATA31D4Q6ZUB0 917 aa21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 FAM50BQ9Y247 325 aa21.36■■□□□ 1.01
PDLIM2-207ENST00000409417 GRXCR2A6NFK2 248 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 CST3P01034 146 aaPredicted RBP21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 C4BPAP04003 597 aaKnown RBP21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 ITIH3Q06033 890 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 PAK1Q13153 545 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 TRPC3Q13507 836 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 C1orf220Q5T0J3 134 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 TDRD10Q5VZ19 366 aaKnown RBP21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 WSCD1Q658N2 575 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 MLKLQ8NB16 471 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 KREMEN2Q8NCW0 462 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 ZNF461Q8TAF7 563 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 ADAM7Q9H2U9 754 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 CTNND2Q9UQB3 1225 aa21.35■■□□□ 1.01
PDLIM2-207ENST00000409417 NCOR1O75376 2440 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 OR6C75A6NL08 312 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 MBTPS2O43462 519 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 PHACTR2O75167 634 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 ROR1Q01973 937 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 BIRC3Q13489 604 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 METTL23Q86XA0 190 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 CEP63Q96MT8 703 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 DUSP9Q99956 384 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 SFXN1Q9H9B4 322 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 FBXW11Q9UKB1 542 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 SNX9Q9Y5X1 595 aa21.34■■□□□ 1.01
PDLIM2-207ENST00000409417 SPDYE4A6NLX3 237 aa21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 HUS1O60921 280 aa21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 ABLIM3O94929 683 aa21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 ATICP31939 592 aa21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 ZACNQ401N2 412 aa21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 SV2AQ7L0J3 742 aa21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 PDCL2Q8N4E4 241 aa21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 C12orf76Q8N812 135 aaPredicted RBP21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 USP15Q9Y4E8 981 aaPredicted RBP21.33■■□□□ 1.01
PDLIM2-207ENST00000409417 STAU1O95793 577 aaKnown RBP21.32■■□□□ 1
PDLIM2-207ENST00000409417 TRIM49P0CI25 452 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 TRIM49CP0CI26 452 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 GTF2H1P32780 548 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 ARPP19P56211 112 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 MYL6P60660 151 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 NCOA4Q13772 614 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 SMAD2Q15796 467 aaKnown RBP21.32■■□□□ 1
PDLIM2-207ENST00000409417 RARS2Q5T160 578 aaKnown RBP21.32■■□□□ 1
PDLIM2-207ENST00000409417 TPGS2Q68CL5 300 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 CES5AQ6NT32 575 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 C15orf39Q6ZRI6 1047 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 RBM43Q6ZSC3 357 aaKnown RBP21.32■■□□□ 1
PDLIM2-207ENST00000409417 LIMS2Q7Z4I7 341 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 FILIP1Q7Z7B0 1213 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 TMEM86AQ8N2M4 240 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 TOP6BLQ8N6T0 577 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 CMASQ8NFW8 434 aaPredicted RBP21.32■■□□□ 1
PDLIM2-207ENST00000409417 SPATA18Q8TC71 538 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 SUSD6Q92537 303 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 SYAP1Q96A49 352 aaPredicted RBP21.32■■□□□ 1
PDLIM2-207ENST00000409417 APOL5Q9BWW9 433 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 XYLT2Q9H1B5 865 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 RWDD2AQ9UIY3 292 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 L1RE1Q9UN81 338 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 WDR27A2RRH5 827 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 PAPLNO95428 1278 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 STX17P56962 302 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 PPP3CAQ08209 521 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 SOWAHAQ2M3V2 549 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 LIN9Q5TKA1 542 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 TMC5Q6UXY8 1006 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 RTL10Q7L3V2 364 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 DPH6Q7L8W6 267 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 THEM5Q8N1Q8 247 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 VRTNQ9H8Y1 702 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 ZDHHC7Q9NXF8 308 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 ARMCX3Q9UH62 379 aaPredicted RBP21.32■■□□□ 1
PDLIM2-207ENST00000409417 MAFFQ9ULX9 164 aa21.32■■□□□ 1
PDLIM2-207ENST00000409417 STX10O60499 249 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 RFPL2O75678 378 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 ZMYND10O75800 440 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 VNN1O95497 513 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 IL9P15248 144 aa21.31■■□□□ 1
PDLIM2-207ENST00000409417 ATF2P15336 505 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms